Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30213g00028 ATGAAGGTTGACAACGATGAAGAAGGAGCTGCTGACGGCGCCAGTGACAGTGAAGAGCTATCAGATTTTGTCACATTCAATGATCAGCACTCACTCCATCTTGCCACAAGGAACAACAATAACACATGTGATCAAAAAACACTCACATCTATTTCTGATCTTAATTATCCATCAATTGCAGTGCCAAATCTCAAAGATAGTACCTGGGTAACTAGGATTGTTACCAATGTGGGAAAATCAAGTACTATATATAAAGCTTCAATGGTTTCTCCACCTGGTGTTAATGTCACTGTTATACCAAACAGATTAGTGTTATCAAGATTAGGACAGAAAATCAAGTTTAGTGTGAATTTAAAGTGA 360 0.375 MKVDNDEEGAADGASDSEELSDFVTFNDQHSLHLATRNNNNTCDQKTLTSISDLNYPSIAVPNLKDSTWVTRIVTNVGKSSTIYKASMVSPPGVNVTVIPNRLVLSRLGQKIKFSVNLK 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30213g00028 119 Gene3D - 25 119 - -
Stsc30213g00028 119 Pfam Fibronectin type-III domain 53 118 IPR041469 -
Stsc30213g00028 119 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30213g00028 Stsc-Chr30213 189163 190249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30213g00028 50 118 Subtilisin-like Serine Gene Family AT1G32970 46.377 8.71e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30213g00028 - - aip:107623714 160.229