Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30213g00024 ATGGGTTTCTTGGTAACGTCGCTAATCTTCTTAGTCGTTGGTATAATCGCGTGCCTTTGCACCAGAATTTGCTGCAACAGAGGGCCTTCAACTAATCTCTTTCATCTAACTTTGGTCATTACTGCAACAATATGCTGTTGGATGATGTGGGCTATTGTATATCTAGCGCAGATGAAACCGCTCATCGTACCTGTACTGAATGAGGGCGAATAA 213 0.4319 MGFLVTSLIFLVVGIIACLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMKPLIVPVLNEGE 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30213g00024 70 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Stsc30213g00024 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 69 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30213g00024 Stsc-Chr30213 161674 164472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30213g00024 1 70 Primary Pumps ATPases(2) AT5G55290 82.857 1.47e-39 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30213g00024 K02153 - gmx:100781475 146.362