Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30212g00076 ATGGCTAATAATAAAGGATTCAAGCTGAAATTCAATATCCCTTTATTCCAAATGTGTCGTTCTAAAGACACTTCCGCTTTCCCAGGAAACCCTGTAGTTCCTGCAATATACCGTCTTTCTCCGGTGAACCCGAAAACACATGACGTGTCAATACCTCCTCCGCCACCTTCCTCACCGGAATATAGGGGTAGTAAGGTCACTTCAAGAATCATGTCCTTACGCCAAATGTGCCGTGACGACCACTACCGCGACAAGCAAGTAAACACCAGAGGCAGAAGAAGCACATCCAGCGTTCCTTCCAGGAGAAGCAACGTGGCGATGGATAACGAAGAAGAAAGCGAGTCTCTAATTTCTTGCACCACAAGTTTCTCGGACGAGTCTTATTCTCTCAAACCGGAGAGAGAGTTAGGGAGTAGCAGCAGCGGCAGCAGGCACAGGAGGAAGATAAGCAGCGTGAAGAAGGTTCATAGAATGAGGTTCAACAGCGCAAGAGTAGAAGAACTACTACCGGAAACAGAACAAGTGAAGAAGACAAAGACGAAGACGAAGTTTGTGTCGTCGACGGCATCCACGACAAGGATGAGGCGGAGCAGCGTGGAGGGGAAGGTGAGGGAGAGTTTTGCGGTGGTGAAGAAGTCGAAGGATCCGTACGAGGACTTCAAGAGATCAATGATGGAGATGATAAGGGAGATGGAGATGCGTGATGCAGAGGATTTGCAGCAACTGCTTCAGTGTTTCTTGGCTCTGAACTCGAGAAGCTATCACGATGTGATTGTGCGTGCTTTCATGGAGATATGGCAAGAGATGTTTCTCATGAAGGCTGCGCCTTCTACTAGCTCCAACTCTACCAACGATATTCTCCAAAGAGATCAACTCCGACTAGGAGAGTAG 891 0.4804 MANNKGFKLKFNIPLFQMCRSKDTSAFPGNPVVPAIYRLSPVNPKTHDVSIPPPPPSSPEYRGSKVTSRIMSLRQMCRDDHYRDKQVNTRGRRSTSSVPSRRSNVAMDNEEESESLISCTTSFSDESYSLKPERELGSSSSGSRHRRKISSVKKVHRMRFNSARVEELLPETEQVKKTKTKTKFVSSTASTTRMRRSSVEGKVRESFAVVKKSKDPYEDFKRSMMEMIREMEMRDAEDLQQLLQCFLALNSRSYHDVIVRAFMEIWQEMFLMKAAPSTSSNSTNDILQRDQLRLGE 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30212g00076 296 MobiDBLite consensus disorder prediction 128 142 - -
Stsc30212g00076 296 MobiDBLite consensus disorder prediction 80 151 - -
Stsc30212g00076 296 NCBIfam uncharacterized plant-specific domain TIGR01568 207 269 IPR006458 -
Stsc30212g00076 296 MobiDBLite consensus disorder prediction 276 296 - -
Stsc30212g00076 296 MobiDBLite consensus disorder prediction 91 127 - -
Stsc30212g00076 296 MobiDBLite consensus disorder prediction 45 65 - -
Stsc30212g00076 296 Pfam Transcriptional repressor, ovate 213 270 IPR006458 -
Stsc30212g00076 296 ProSiteProfiles OVATE domain profile. 209 268 IPR006458 -
Stsc30212g00076 296 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 104 270 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30212g00076 Stsc-Chr30212 364783 365673 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc30212g00076 Ovate 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30212g00076 - - aip:107608440 446.047