Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30212g00066 | ATGCATGCAATGATAATTGCCATGGAGCTTCACCGAGGAATGTTTGTAACACTTATAACGCTCTTCTTTTTCCTCCACTTTGGTTTCAGCTCAACCACCACCACCATCACTGAAACTGAAAGATACGCGTTACTTCAACTTCGCAAATCGTTGGGAATTAGCCACAAAGACTGGCCCAGAAAAGCCGAACCATGCCGGAACTGGACCGGAGTTAAGTGCCAATCTGGTCGAGTCGTTGCCCTTAACATCACCGGTTTAAGGCGAACCAGAGTCAATAATCTTCTGCTTCAGTCTCACTCTCACTCTCTCACGAACCTCATCTTCTTATCTTCCTTCACTGCTTCCGGTTTCGTGCTCAATGGTTCCATTCCCAACTGGTTCGGACAGCGCCTTACCAAGCTCCAAGTTCTTGATCTCAGCTCTTGTTCCCTCACCGGCTTGATTCCTTCTTCGCTCGGTGGTTTAACTGAGTTAAAGTTTCTGTCACTTTCGGGCAATGAACTCACGGGTAGATTGCCTTCGCAGCTAGGAAGGCTGTCGGGGTTGACCGTTCTTGATCTTTCTGACAATTCCCTGACCGGAACAGTTCCCAACACAGTGTCCTCTCTGAAGAGCCTTGAAAGGCTTGACCTTTCTGGTAATTTTCTATCTGGGTGTGTTCCACCTGGCTTGGCTGCACTTTCTAATCTCCAAAGTTTGAATCTTTCAGACAATGGCCTCACTGGTTCACTTCATCTTCATCTGGGTAACCTTTCTAGCTTGGTCACTCTTGATCTCAGCAAGAATTCTCTGTCTGGGTCATTGCCCAGTGTTTTGTTTTCCATCCTTTTTAAACTTGAAGTTCTCATTCTAAGCGAGAATGCTTTTGATGGGACTATTCCTGCTACATTGTGGTCAGGGACCAACTTGCAATTTCTTGATTTATCCGGAAATAACCTCACTGGTCCCTTGCCAAAACTAGCTAACTCAAACAATGTTAATTACAGTGGTGCCACCTTTAACGTGTCCAATAATTTGTTGTATGGATCTCTTAATAACATTTTGATTAGCAAGTTTAAAGTAATTGACTTGTCCAATAACTACTTCCAAGGTGAGGTGCAAATTGGTGTTTTTCATAATGATGTAATTTCTCTTGCTAGAAATTGCCTAAGGATGATTCAAAATCAGAGGAATTTTGGGGAATGTAGGGTGTTCTATGGCAAGAGGAGATTAGCCTTTAGTCTTGGTAGTGCTCAAGGACCTGCACAATCACCATTGCAAGATTCAAAGTCAAGAAACAACAAAGAAGTAATATTCATTCTGGCAGGTATATTTGTTGGACTTGGCTTTATAGTGGTTCTTATATTGGTCCTCATAGTTCTGCTAGAAATTGGTGATAATCATAGCAGCAGCATCACAATGCAAAGACAAAAAGGGACGGCGAATTTGTGGCCTGATCATGAAGTAGAAAATCCTACTACACCTCCTAAAGATCATGTGTTTGCAGCTAGGTTGGGTGAATCTTTTACTTATGAGCAAATGCTCCAATTCACTGATAACTTTGCTGAAGCAAATTTAATCAAACGTGGTCATTCTGGAGATCTATTCTTTGGATCCTTGCGAGGTGGAGTAACTGTTGTTGTAAAGAAGGTCAATTTGAATGTATTGAAGAAAGAATCATACATGGTAGAGTTAGGACTATTGAGTAAGGTTTCACATGCAAGATTGGTGCCAGTCTTGGGACACTGCTTGGAGAATGAGCATGAGAAATGCATAGTTTACAAATATATGCCAAATGGTGATTTGGCTACTTCTTTGTACAATGTCACATTTTCAGAAGATAAATTTCAGTCTCTGGATTGGATCACGAGACTGAAAATCGCAACAGGAGCTGCTGAAGGTCTATCTTACCTACATGAGTGCAACCCTCCCTTTGTTCACAGAGATGTCCAAGCAAGCAGTATACTTCTTGATGATAAATTTGAAGTGCGGCTTGGAAGTTTGAGCGAGGTTACTTCCCAAGGAGGTCTCCATCAGAGTGTCATCACCAGGATTTTCCGCAAGTCATTATCTTTTGATCAAGGCAATTCTGGTTCATCATTTGCAACTTGTTCTCAGGACGTGTACTGTTTTGGGAAGGTTTTGCTAGAGCTCATTACTGGTAACATCGGTTTCAGTAATTCAGACGATGCTACCACCAAAGAGTGGTTAGAGCACACACTGTCCTACATAAGTATATATGACAAAGATCAAGTGAGTAAGATTGTTGACCCAAATTTAATCGTAGATGATGATTTATTGGAAGAGGTATGGGCAATGGCAATTGTGGCCAGATCATGCCTGAATCCCAAGCCTTCTAAACGCCCTCCTGTGAGATATGTCCTAAAAGCATTGGAAAATCCCGTTAAGGTTGTCAGAGAAGAAAGTTATAGTTCATCAAGATTAAGAACAACTTCATCCAGATCTTGGAGCTTTGCATTCTTTGGTAGCTGGAGACTGAGCTCATCAGAGATTTCAACAGTCACAGGAACAGGGCATACAAACAGAGAGGGTACCGATGGCTTTAAGGACTCGGGAAGAGTAGGTTCTCAAAGTAGTGTTGGATTGGATCTCTCATCTATCCATAAGAGGTCATCCAATGAAATTTTCACCGAACCATTGGCAATGCAAGATATCGAGTGGCAAGATGGGCAGTTGGGCACTAAGGACTAG | 2691 | 0.4225 | MHAMIIAMELHRGMFVTLITLFFFLHFGFSSTTTTITETERYALLQLRKSLGISHKDWPRKAEPCRNWTGVKCQSGRVVALNITGLRRTRVNNLLLQSHSHSLTNLIFLSSFTASGFVLNGSIPNWFGQRLTKLQVLDLSSCSLTGLIPSSLGGLTELKFLSLSGNELTGRLPSQLGRLSGLTVLDLSDNSLTGTVPNTVSSLKSLERLDLSGNFLSGCVPPGLAALSNLQSLNLSDNGLTGSLHLHLGNLSSLVTLDLSKNSLSGSLPSVLFSILFKLEVLILSENAFDGTIPATLWSGTNLQFLDLSGNNLTGPLPKLANSNNVNYSGATFNVSNNLLYGSLNNILISKFKVIDLSNNYFQGEVQIGVFHNDVISLARNCLRMIQNQRNFGECRVFYGKRRLAFSLGSAQGPAQSPLQDSKSRNNKEVIFILAGIFVGLGFIVVLILVLIVLLEIGDNHSSSITMQRQKGTANLWPDHEVENPTTPPKDHVFAARLGESFTYEQMLQFTDNFAEANLIKRGHSGDLFFGSLRGGVTVVVKKVNLNVLKKESYMVELGLLSKVSHARLVPVLGHCLENEHEKCIVYKYMPNGDLATSLYNVTFSEDKFQSLDWITRLKIATGAAEGLSYLHECNPPFVHRDVQASSILLDDKFEVRLGSLSEVTSQGGLHQSVITRIFRKSLSFDQGNSGSSFATCSQDVYCFGKVLLELITGNIGFSNSDDATTKEWLEHTLSYISIYDKDQVSKIVDPNLIVDDDLLEEVWAMAIVARSCLNPKPSKRPPVRYVLKALENPVKVVREESYSSSRLRTTSSRSWSFAFFGSWRLSSSEISTVTGTGHTNREGTDGFKDSGRVGSQSSVGLDLSSIHKRSSNEIFTEPLAMQDIEWQDGQLGTKD | 896 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30212g00066 | 896 | Gene3D | Transferase(Phosphotransferase) domain 1 | 590 | 811 | - | - | |
Stsc30212g00066 | 896 | PRINTS | Leucine-rich repeat signature | 182 | 195 | - | - | |
Stsc30212g00066 | 896 | PRINTS | Leucine-rich repeat signature | 251 | 264 | - | - | |
Stsc30212g00066 | 896 | ProSiteProfiles | Protein kinase domain profile. | 514 | 796 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30212g00066 | 896 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 129 | 220 | - | - | |
Stsc30212g00066 | 896 | ProSiteProfiles | Leucine-rich repeat profile. | 302 | 324 | IPR001611 | GO:0005515 | |
Stsc30212g00066 | 896 | Pfam | Leucine rich repeat | 253 | 313 | IPR001611 | GO:0005515 | |
Stsc30212g00066 | 896 | Pfam | Leucine rich repeat | 125 | 168 | IPR001611 | GO:0005515 | |
Stsc30212g00066 | 896 | Pfam | Leucine rich repeat | 176 | 214 | IPR001611 | GO:0005515 | |
Stsc30212g00066 | 896 | Pfam | Leucine Rich repeat | 228 | 242 | IPR001611 | GO:0005515 | |
Stsc30212g00066 | 896 | Gene3D | Ribonuclease Inhibitor | 36 | 198 | IPR032675 | - | |
Stsc30212g00066 | 896 | Pfam | Leucine rich repeat N-terminal domain | 39 | 73 | IPR013210 | - | |
Stsc30212g00066 | 896 | FunFam | Predicted protein | 485 | 589 | - | - | |
Stsc30212g00066 | 896 | SUPERFAMILY | Protein kinase-like (PK-like) | 493 | 791 | IPR011009 | - | |
Stsc30212g00066 | 896 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 221 | 317 | - | - | |
Stsc30212g00066 | 896 | MobiDBLite | consensus disorder prediction | 835 | 859 | - | - | |
Stsc30212g00066 | 896 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 519 | 572 | IPR000595 | - | |
Stsc30212g00066 | 896 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 590 | 812 | - | - | |
Stsc30212g00066 | 896 | Gene3D | Ribonuclease Inhibitor | 199 | 394 | IPR032675 | - | |
Stsc30212g00066 | 896 | SUPERFAMILY | L domain-like | 47 | 362 | - | - | |
Stsc30212g00066 | 896 | Pfam | Protein tyrosine and serine/threonine kinase | 520 | 736 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc30212g00066 | 896 | Gene3D | Phosphorylase Kinase; domain 1 | 482 | 589 | - | - | |
Stsc30212g00066 | 896 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 22 | 371 | - | - | |
Stsc30212g00066 | 896 | SMART | LRR_typ_2 | 276 | 300 | IPR003591 | - | |
Stsc30212g00066 | 896 | SMART | LRR_typ_2 | 203 | 226 | IPR003591 | - | |
Stsc30212g00066 | 896 | SMART | LRR_typ_2 | 131 | 154 | IPR003591 | - | |
Stsc30212g00066 | 896 | SMART | LRR_typ_2 | 179 | 202 | IPR003591 | - | |
Stsc30212g00066 | 896 | SMART | LRR_typ_2 | 251 | 275 | IPR003591 | - | |
Stsc30212g00066 | 896 | SMART | LRR_typ_2 | 155 | 178 | IPR003591 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30212g00066 | Stsc-Chr30212 | 327554 | 331262 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30212g00066 | 39 | 680 | Miscellaneous Gene Families | AT2G16250 | 45.846 | 0.0 | 540 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIV | Stsc30212g00066 | PK_Tyr_Ser-Thr | 7.2e-21 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30212g00066 | - | - | pcin:129301220 | 936.791 |