Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30212g00052 ATGGCTGCCATTAACAGCACCAAAGGAGTCTATGAATTTGTTAGACTCCGCCACCTGAGGTATGGGAATTGCTTCAAGACCAAGTTGTTCAGACAAACACATGTGTTTATTTCTAGCACGGATTCAGCAAAAGCAATCCTAAACAACGAGGGAGGCAAATTCTCAAAGAGGTACATACAGTCCATATCAGAGCTCTTGGGACACCATAGCTTGCTCTGTGCTCATCACCACCATCACAAGCTCATTCGTGGCCGTCTCCTTACTCTCTTCTCCACAGATGCTTTGTCCTCCTTTGTTCAAATGTTCGATTCCCTCCTTCTTGAATCCATCACTACCTGGCCTTGTGGACCCGTTCTTCTCATCCAAAATGAAGCATTCAAGCTAGCATGTAAGGCAATGTGCAAGATGCTGATAAGCATGGAGAGTGGCTATGAGCTAGTGATGATGCAGAAGGACATTGCTCATTTATGTGAAGCTATGCTTGCATTACCCTTGAGGCTGCCATGGACTAGATTCTACAATGGACTACAGGCTCGGAAAAGAATTATGGAAATATTGGAGAAGGAGATTAGTAAAAGAAGAAGTGGAATAAGAACTAATGACAAAGTAGATTTTCTCCAACAACTTTTAGAAGAACAAGATGATAATAAGTTAAATGATGAAGAGATCAAAGACAACATCTTAACTATGATGATTGCAGGACAGGATACAATCGCAAATGCAATGACATGGGTGGTCAAATTCGTGGACGAGAATCAAGAAGTCCTTAATACGCTTACGAAGGAGCAAATCCAAATTGAGAAAAATGGTAGAGCAACAAGGGCCAATCTTACATTAGAGGATCTCAATGAGATGCAATATGCTTCTAAGGTTGTGACAGAAGCCTTAAGAATGGCATCTGTGGTACAGTGGCTTCCCAGAGTAGCACTTCAAGATTGTGAGATTCAAGGTTTTAAAATCAAGAAAGGATGGAACGTTAATATTGATGCTAAGTTCATACACTTTGATCCAACTGTCTACAATGATCCATATGTATTCAATCCTTCTAGATTTCCGGAAGAGTCTAAACCATACAGCTTCCTAGCCTTTGGAATGGGTGGAAGGACATGCCTTGGGAAGAACATGGCTAGAGCCATGATGCTGGTGTTCCTCCACCGTCTCATCACCACTTACAAGTGGAAGGTGATTGATTCAGACTCAAGTATTCAGAAATGGGCACTTTTCACAAAACTCAAGAGTGGCTGCCCTGTTCGTTTGACATCTCTGAAACAGAACACAAATTAA 1284 0.4167 MAAINSTKGVYEFVRLRHLRYGNCFKTKLFRQTHVFISSTDSAKAILNNEGGKFSKRYIQSISELLGHHSLLCAHHHHHKLIRGRLLTLFSTDALSSFVQMFDSLLLESITTWPCGPVLLIQNEAFKLACKAMCKMLISMESGYELVMMQKDIAHLCEAMLALPLRLPWTRFYNGLQARKRIMEILEKEISKRRSGIRTNDKVDFLQQLLEEQDDNKLNDEEIKDNILTMMIAGQDTIANAMTWVVKFVDENQEVLNTLTKEQIQIEKNGRATRANLTLEDLNEMQYASKVVTEALRMASVVQWLPRVALQDCEIQGFKIKKGWNVNIDAKFIHFDPTVYNDPYVFNPSRFPEESKPYSFLAFGMGGRTCLGKNMARAMMLVFLHRLITTYKWKVIDSDSSIQKWALFTKLKSGCPVRLTSLKQNTN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30212g00052 427 PANTHER CYTOCHROME P450 26 11 397 - -
Stsc30212g00052 427 SUPERFAMILY Cytochrome P450 8 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30212g00052 427 CDD CYP90-like 17 420 - -
Stsc30212g00052 427 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 363 372 IPR017972 GO:0005506|GO:0016705
Stsc30212g00052 427 PRINTS P450 superfamily signature 290 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30212g00052 427 PRINTS P450 superfamily signature 361 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30212g00052 427 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30212g00052 427 PRINTS P450 superfamily signature 233 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30212g00052 427 Pfam Cytochrome P450 6 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30212g00052 427 Gene3D Cytochrome P450 2 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30212g00052 427 PRINTS E-class P450 group I signature 222 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30212g00052 427 PRINTS E-class P450 group I signature 329 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30212g00052 427 PRINTS E-class P450 group I signature 360 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30212g00052 427 PRINTS E-class P450 group I signature 18 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30212g00052 427 PRINTS E-class P450 group I signature 370 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30212g00052 Stsc-Chr30212 272325 274970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30212g00052 1 393 Cytochrome P450 AT1G19630 57.828 1.14e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30212g00052 - - lang:109327951 630.172