Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30212g00044 ATGGGTTCATCAAGCGGAAACTCGAACCTTCAAAGCTCAGGTTCAGAGGAGGATATGCTGATGATGATGATGGATGAAAGGAAGAAGAAGAGGAAGCAATCAAACAGAGAATCAGCAAGAAGATCAAGGATGAGGAAGCAGAATCACATGGATGATCTCATGAATGAGGTGTGCAAGCTTGGAAAGGAAAAAGATGAAATCATCAAAGGCATAGACTTAACCACACAACAATATTTGTGTGTTGAGTCTCAAAATTCAATCCTTAGGGCCCAGATGCAAGAACTCACTCACAGGCTTCAATCACTGAATCAAATCATTCATCTCATCAACACAACACCACCACCTAATCAATATGATGATTATCTTCTGCCATCACCAACACCAGCTGCTGAAAATTTGTTCATGAATATGAATATGTTCAATCATGTCAACCAACCAATTTCGGCTTCTGCAGAGATGTTATATCAGTGGGTGAATTGA 480 0.4 MGSSSGNSNLQSSGSEEDMLMMMMDERKKKRKQSNRESARRSRMRKQNHMDDLMNEVCKLGKEKDEIIKGIDLTTQQYLCVESQNSILRAQMQELTHRLQSLNQIIHLINTTPPPNQYDDYLLPSPTPAAENLFMNMNMFNHVNQPISASAEMLYQWVN 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30212g00044 159 Coils Coil 85 105 - -
Stsc30212g00044 159 CDD bZIP_plant_GBF1 28 78 IPR045314 GO:0003700|GO:0006355
Stsc30212g00044 159 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 121 - -
Stsc30212g00044 159 SUPERFAMILY Leucine zipper domain 27 82 IPR046347 GO:0003700|GO:0006355
Stsc30212g00044 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 25 88 IPR004827 GO:0003700|GO:0006355
Stsc30212g00044 159 Gene3D - 25 78 - -
Stsc30212g00044 159 Coils Coil 36 56 - -
Stsc30212g00044 159 MobiDBLite consensus disorder prediction 1 51 - -
Stsc30212g00044 159 SMART brlzneu 23 87 IPR004827 GO:0003700|GO:0006355
Stsc30212g00044 159 Pfam bZIP transcription factor 27 78 IPR004827 GO:0003700|GO:0006355
Stsc30212g00044 159 MobiDBLite consensus disorder prediction 1 16 - -
Stsc30212g00044 159 FunFam BZIP transcription factor 25 76 - -
Stsc30212g00044 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 30 45 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30212g00044 Stsc-Chr30212 228982 229461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30212g00044 23 154 bZIP Transcription Factor Family AT4G34590 48.148 1.32e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc30212g00044 bZIP_1 1.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30212g00044 K25786 - adu:107460079 226.483