Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30212g00026 ATGGCTGATTCAGGATCTTCATCGTCGAGGAGGATGTGGTGTTCCATCCCAGAGAAGCTTCAGCTGCATGGAGCCATGCTGGCACTCCAGTTTGGCTATGCAGGCTTTCATGTTGTCTCCAGAGCTGCCCTTAACATGGGCGTTAGCAAACTCGTCTTCCCTGTCTACCGCAACATCATTGCTTTTCTCCTCCTCCTTCCTTTTGCTTACTTCTTGGAGAAGAAGGAGAGGCCTGCCATTACTTTAAACTTCCTACTCCAGTTCTTTCTTCTCGCACTTGTCGGGATTACAGCGAACCAAGGGTTTTACTTGCTGGGATTGGACAACACATCTCCAACATTTGCATCAGCAATACAGAACTCAGTCCCAGCCATCACATTTCTCATGGCAGCCATACTCAGGATAGAGAAAGTCAGGCTCGACAGAAAAGACGGGGTCGCAAAGGTAGCCGGAACAGTCTTCTGTGTGGCGGGTGCCTCCGTCATAACACTCTACAAGGGCCCCACCATCTACAGCCCAGTACCGCCACTGCAGACCACAGTACCCACAATAGTAAGACTAGGGGATGCAGCATCAGAGGGCAAGAACTGGACCCTGGGCTGCCTCTACCTCATTGGCCATTGCTTGTCTTGGTCCGGCTGGCTCGTCCTCCAGGCACCGGTTCTCAAGAAGTACCCGGCTCGGCTCTCCGTCACTTCCTACACGTGCTTCTTTGGACTGCTGCAATTTCTTGCCATTGCTCTCGTGGTTGAAAGAGATATGAATAAATGGATTTTCCAATCAGGTGCTGAAGTTTTCACTATTGTATACGCTGGAGTGGTGGCTTCCGGAATAGCCTTCGCAGTGCAGATATGGTGCATTGACAGAGGTGGCCCTGTCTTCGTGGCGGTTTATCAGCCAGTTCAGACCCTTGTGGTCGCTGTCATGGCTTCCCTTGCTTTGGGTGAACAGTTCTACTTAGGCGGGATCATTGGAGCAGTTTTGATCGTAGTGGGTCTGTATCTAGTCTTGTGGGGTAAATCTGAAGAGAGGAAATTTGCATCTCAATCTCAGCATGCCATTGCTTCCATGCCAGCAGAGCACAGTAGTAGTAGCATCAGGCCTGCAAGCCATGCCAAAGCATCTCTTACTCAGCCTCTTCTTCCTTCCTCAACAGAGAATGTTTGA 1167 0.5047 MADSGSSSSRRMWCSIPEKLQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRIEKVRLDRKDGVAKVAGTVFCVAGASVITLYKGPTIYSPVPPLQTTVPTIVRLGDAASEGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLAIALVVERDMNKWIFQSGAEVFTIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAVMASLALGEQFYLGGIIGAVLIVVGLYLVLWGKSEERKFASQSQHAIASMPAEHSSSSIRPASHAKASLTQPLLPSSTENV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30212g00026 388 PANTHER WAT1-RELATED PROTEIN 24 350 IPR030184 GO:0016020|GO:0022857
Stsc30212g00026 388 MobiDBLite consensus disorder prediction 361 388 - -
Stsc30212g00026 388 Pfam EamA-like transporter family 199 337 IPR000620 GO:0016020
Stsc30212g00026 388 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020
Stsc30212g00026 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Stsc30212g00026 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30212g00026 Stsc-Chr30212 155621 158013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30212g00026 1 388 Nodulin-like Gene Family AT1G75500 74.112 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30212g00026 - - gmx:100798686 620.928