Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30212g00004 ATGCCTTCATCAACCGGCATCGGAAAATGCAGCAAAATCCGCCACATTGTGTGGCTCCGCCAGATGCTACGCCGCTGGCGAAATAAAGCCCGTAAGCGCACGCCCTCCGATGTCCCCTCTGGACACGTGGCAGTGTGCGTGGGCAGCAACTACACGAGATTCGTGGTGCGCGCCACCCACCTTAACCACCCTGTGTTCAAGAAGCTTCTATTCCAGGCGGAGGAAGAGTACGGATTCTCGAACCACGGCCCCCTGGCGATTCCATGCGAGGAGGCCGTGTTCAAAGAGGTGATCCGGTTCATTTCCCGATCTGACTCAGCGTCCAGCCGATTCGTTAACCTGGAGGACCTCCAGAGATACTGCCACGCTGGCAGCATCCGTGCCAACGTGGATTTCTGGGCCGACTCCATGCCGTTACTCACTAACAACTAA 432 0.5718 MPSSTGIGKCSKIRHIVWLRQMLRRWRNKARKRTPSDVPSGHVAVCVGSNYTRFVVRATHLNHPVFKKLLFQAEEEYGFSNHGPLAIPCEEAVFKEVIRFISRSDSASSRFVNLEDLQRYCHAGSIRANVDFWADSMPLLTNN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30212g00004 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 23 97 IPR003676 GO:0009733
Stsc30212g00004 143 Pfam Auxin responsive protein 20 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30212g00004 Stsc-Chr30212 22235 23247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30212g00004 7 140 Calmodulin-binding Proteins AT4G34750 49.655 6.37e-43 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30212g00004 K14488 - zju:107435838 218.394