Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30211g00060 ATGGCGGCAGGCCTCTCCGCCGCAATATCCTGGAAGCCCCTCCTCCGTCCCCACCACCACCACCATCCCTTCTCTCCTCACAACAACAAGTCAATTATGAATCCCTTAACTCCTCCTGCCTTCTTCGGAAGACACCAGAAGCTCCTTACAATGAAGTTCGCAACCTGCGTTCTCATGGAGGACCCTAAGAAGAGCACCGCAAGCCACGTCGCGGAAACCGAAACGGAAGAAGAAACGGTTGTTGTTTATCCACAGCTGGTGCCGCCACGTGTCGCTGAGAGATTGGCCAGGAAGAAGTCGGAGAGATTGACGTATCTTATTGCCGCCATGATGTCTACTGCTGGCATCACTTCCATGGCTGTCTTCGCTGTTTATTATAGATTCGCATGGCAATTCCAGGGTGGAGAAATTCCATTGTCTGAAATGTTTGGCACATTTGCTCTATCCGTTGGTGCTGCTGTGGGTATGGAATTTTGGGCTAGATGGGCACACAGAGCTCTCTGGCATGCTTCCTTGTGGCACATGCATGAGTCCCACCATAGACCAAGAGACGGACCCTTCGAATTGAACGATGTGTTCGCGATAATAAACGCTGTGCCCGCCATTGCTCTCCTCTCCTTCGGTTTCTTCCACAAGGGACTAGTCCCCGGCCTCTGCTTTGGGGCTGGTCTTGGAATCACAGTGTTTGGAATGGCTTACATGTTTGTACACGATGGATTAGTTCACAGGAGATTCCCTGTAGGTCCCATTGCCAATGTTCCCTACTTCAGAAAAGTTGCTGCTGCCCACCAACTTCACCATTCGGACAAATTCAATGGGGTGCCATATGGGCTTTTCTTGGGACCAAAGGAACTTGAAGAAGTGGGAGGGTTAGAAGAGCTTGAGAAAGAGATTAGTAGGAGAATAAAATCTTACAATAAAAATAGTTCATGA 933 0.4952 MAAGLSAAISWKPLLRPHHHHHPFSPHNNKSIMNPLTPPAFFGRHQKLLTMKFATCVLMEDPKKSTASHVAETETEEETVVVYPQLVPPRVAERLARKKSERLTYLIAAMMSTAGITSMAVFAVYYRFAWQFQGGEIPLSEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHRPRDGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYFRKVAAAHQLHHSDKFNGVPYGLFLGPKELEEVGGLEELEKEISRRIKSYNKNSS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30211g00060 310 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 306 IPR045019 GO:0016491
Stsc30211g00060 310 Pfam Fatty acid hydroxylase 152 279 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30211g00060 Stsc-Chr30211 346468 349307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30211g00060 1 222 Chloroplast and Mitochondria Gene Families AT4G25700 59.641 1.48e-88 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30211g00060 K15746 - pvy:116107134 426.017