Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30210g00071 | ATGGAAAAGGCCCTCCAAGCCGTCCTCGCCGCCATGGGCACCTTCATCGTCGTCACCCTCCTCTTCGCCATCCTCATCCTCCTCTGCCAGCGCCGCAAGACCAAGACCTCCATGCTTCCAGCCCGCCAAAACAATCCAACCCGAACCCGACCCGTACCAGACCCTAACCAATCCTCCCTCTCCATCGTCGACGCCAGCTGGTCCTCCGACCCCAACCTCAAGATCTCCCTTGCGGAGCTCGCACGCGCCACCGACAACTTCTCCCCTCACCTCATCGTCGGCGACGGCAGCTTCGGCCTGGTCTATAAGGCCCGCCTCAACAACGGCACCCTCGTCGCCGTAAAGAAGCTCTCCCCGGACGCCTTCCAAGGCTTCCGCGAGTTCCAGGCGGAGATGGAAACCCTAAGCAAGCTCGACCACCCAAACATCGTCAAGATCCTCGGCTACTGGTCCTCCGGCCCCGAACGCTTACTCGTCTACGAGTTCATCGAACGTGGAAACCTCGATCAGTGGCTCCACGAGCCCACCACTGGGCCCGAAGTACACGTATCCCTCAGCGACCTCCGTTTACCTCTGTCATGGGAAACCAGGGTCAACATCATCAGAGGCGTGGCCCATGGGCTTTGCTACCTCCACGGGCTTGATAAGCCCATCATACACAGGGACATCAAGGCTAGTAACGTTTTATTGGACTCCGAATTCAAGGCCCATATAGCTGACTTCGGGCTTGCCCGGAGGATTGACACTTCTAAATATTCACACGTGTCAACGCAGTTTGCCGGGACCATGGGCTACATGCCCCCGGAGTATGTGGCTGGGGCCAATGTGGCTAACCAGAAGGTTGATGTGTATAGCTTTGGGATTTTAATGCTTGAGACAGGCTCAGGGCGCAGGCCCAATTTGCCTGTGAAGATGGGGGAGGAAGATATTGGGCTGGTCCAATGGGCCCGGAAGATGAAGGAGAGGAATTCTGAGATGGATGTTGTTGATGTGAATATTTCAAAGGAAGGTTTAAGGGAAGAGAGTGTTAAAGAATATGTGAGGATTGCTTGCATGTGCACTGGGGAGTTGCAGAAGGAGAGGCCTGAGATGCCTGAGGTTGTTGACTTGTTGGACTCCATGCCGCTCTGA | 1131 | 0.5597 | MEKALQAVLAAMGTFIVVTLLFAILILLCQRRKTKTSMLPARQNNPTRTRPVPDPNQSSLSIVDASWSSDPNLKISLAELARATDNFSPHLIVGDGSFGLVYKARLNNGTLVAVKKLSPDAFQGFREFQAEMETLSKLDHPNIVKILGYWSSGPERLLVYEFIERGNLDQWLHEPTTGPEVHVSLSDLRLPLSWETRVNIIRGVAHGLCYLHGLDKPIIHRDIKASNVLLDSEFKAHIADFGLARRIDTSKYSHVSTQFAGTMGYMPPEYVAGANVANQKVDVYSFGILMLETGSGRRPNLPVKMGEEDIGLVQWARKMKERNSEMDVVDVNISKEGLREESVKEYVRIACMCTGELQKERPEMPEVVDLLDSMPL | 376 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30210g00071 | 376 | FunFam | Phytosulfokine receptor 2 | 163 | 375 | - | - | |
Stsc30210g00071 | 376 | Gene3D | Phosphorylase Kinase; domain 1 | 54 | 162 | - | - | |
Stsc30210g00071 | 376 | ProSiteProfiles | Protein kinase domain profile. | 87 | 376 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30210g00071 | 376 | SUPERFAMILY | Protein kinase-like (PK-like) | 61 | 371 | IPR011009 | - | |
Stsc30210g00071 | 376 | Gene3D | Transferase(Phosphotransferase) domain 1 | 163 | 375 | - | - | |
Stsc30210g00071 | 376 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 3 | 373 | - | - | |
Stsc30210g00071 | 376 | CDD | STKc_IRAK | 93 | 374 | - | - | |
Stsc30210g00071 | 376 | MobiDBLite | consensus disorder prediction | 38 | 57 | - | - | |
Stsc30210g00071 | 376 | SMART | serkin_6 | 87 | 371 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30210g00071 | 376 | Pfam | Protein tyrosine and serine/threonine kinase | 93 | 370 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc30210g00071 | 376 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 218 | 230 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc30210g00071 | 376 | FunFam | Phytosulfokine receptor 2 | 48 | 162 | - | - | |
Stsc30210g00071 | 376 | ProSitePatterns | Protein kinases ATP-binding region signature. | 93 | 116 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30210g00071 | Stsc-Chr30210 | 479009 | 482037 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30210g00071 | 63 | 371 | Receptor kinase-like Gene Family | AT5G07280 | 45.161 | 1.44e-72 | 243 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-1 | Stsc30210g00071 | PK_Tyr_Ser-Thr | 6.7e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30210g00071 | - | - | gmx:100802728 | 538.88 |