Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30210g00046 ATGGCTTTGCATTCCCACATAGAGAGAGTCCTATGGAGCGAGGGCCAAATCTCTCGCCGGGTCACTGACCTCGCCGCCCAAATCTCCACCGACTTTCGCGACGTTTCTCCGCCGCCAGTGGTTGTTGGCGTGGCCACTGGCGCTTTCCTGTTCCTGGCCGACCTGGTTCGAAGGATTGAGCTCCCCGTGGCCGTTGATCTGGTCAGAGCCGAATCCTACGGTTCAGGAACACAGTCCAACTGTGCCCCAACCATTTCCTTCGATTTGAAAGTTGACGTCAAAGGCCGCCACGTCATCTTGGTTGAAGACATTGTAGATACAGGACATACATTATGTAGAGTCATTGCGCACTTGAAATCAAAAGGAGCATCCTGTGTCTCTGTCTGCACTTTCCTTGATAAACCAGCAAGGAGAAAAGTTAATGTTCAACTAGTTGGTCAAGGCAAATTCTACTCGGGATTTGAGTGTCCGGATTATTTTGTTGTTGGATATGGGATGGATTTTGCAGAACTGTACAGAAACTTACCCTACATTGGTGTCTTGAAGCCTGAACATTACCAGTGA 564 0.4929 MALHSHIERVLWSEGQISRRVTDLAAQISTDFRDVSPPPVVVGVATGAFLFLADLVRRIELPVAVDLVRAESYGSGTQSNCAPTISFDLKVDVKGRHVILVEDIVDTGHTLCRVIAHLKSKGASCVSVCTFLDKPARRKVNVQLVGQGKFYSGFECPDYFVVGYGMDFAELYRNLPYIGVLKPEHYQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30210g00046 187 Gene3D - 1 187 IPR029057 -
Stsc30210g00046 187 FunFam Hypoxanthine phosphoribosyltransferase 2 187 - -
Stsc30210g00046 187 CDD PRTases_typeI 45 155 IPR000836 -
Stsc30210g00046 187 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 4 186 - -
Stsc30210g00046 187 SUPERFAMILY PRTase-like 3 186 IPR029057 -
Stsc30210g00046 187 NCBIfam hypoxanthine phosphoribosyltransferase 10 182 IPR005904 GO:0004422|GO:0006166
Stsc30210g00046 187 Pfam Phosphoribosyl transferase domain 16 168 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30210g00046 Stsc-Chr30210 325287 326642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30210g00046 1 186 PRT Gene Family AT1G71750 63.959 4.19e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30210g00046 K00760 - gmx:100037484 300.441