Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30210g00032 ATGGAGCTCCATATCTTGCTCTTACTTATCACACTCTCTCTACTCCCCACCATCATCCTCCGCTCCATCCTCAACTGCCGCCGACAAACCAATCGCCCACCGGGTCCACCCGGCCTACCTATAATCGGAAACCTCCACCAACTCGGCCCTAAACCTCACGTCACTCTCTCCACTCTCTCCAAAACCTACGGCCCCCTCATGTCCCTCCAACTCGGCTCCGTCACTGTCGTCATCGCCTCCTCCCCCTCCGCCGCCCAAGAAATCCTCCAGAGGCACGATAGCTCCTTCTCCGACCGCCCAATCCCGGACGTCATTACCGCACAGCCCAACGTCCTTGACACCCTGGCCTGGTCCCCCGGAGGCCCAAGGTGGCGCAGCCGGCGCCGTCTATGCACCACCAAGATCTTCACCAACCAGCGCCTAGATCTTCTCCAGCACCTCCGGCAGCACAAGGTGCAGCAGCTCGTGCAACACCTTCACCAAAAATCCGCCGCAAGAACACCAGTGAACATCGGAGAGGTGGCGTTCGCCACCATGCTGAACCTTGTGTCGAACACGGTGTTCTCGGAGGACGTGGTAGATCCGGAGTTCAAGAGCGCGGGGGAGTTCAAGGAGGTGGTGTGGCGGATCATGGAGGACGCCGGGAGGGTGAACGTGTCGGATTATTTTCCGGCGGTGAAGTGGTTGGACTTGCAGGGAGTGAAACGGCACGTAACAGTGTCTTATCTGAGAATCCATAAACTGTTTGATGAAATGATTGGGAAGCGCGTGAGGGACAGAGACACGTGCGGGGCGCGTGGTGATGACTTCTTGGATGTGTTGCTTGATCAATGCGAGCAGCAAGAAGACGATAATAACGATGATTCTGAGTCTCTCACTATTGACAACATCAAGCCTATGCTTTTGGATTTGTTCATTGCGGGAAGTGACACTTCAGGATCAACAATAGAATGGGCAATGGCAGAGCTTCTACACAACCCAGAAATCATGCACAAAGCAAGAAACGAACTCAACCAAGTAATTGGAACCACCAACAATCAAGTCAAGGAATCAGACATCCCTAGACTTGAATACATGGAAGCCATAGTCAAAGAAACCTTAAGGCTCCATCCATCAGTGCCTCTTCTCTTGCCTTATCTAGCAGGAAACGATGTCCAAGTAAATGGCTACACCATTCACAAGGGAGACCAAGTTCTCATCAATGCATGGTCTATAGGAAGAGACCCTCAATACTGGGATGATCCTTTAGCTTTTCGACCCGAGAGATTTCTCAGGTCGAAAATAGATTTTAAAGGGAGGAATTTTGAGTACTTGCCATTTGGTGCTGGAAGAAGGATCTGCCCTGGATTGCCCCTTGCTAACAGAATGATTACCTTGGTGGTGGCTGCTTTGGTGCATTCATTTGAATGGAAGCTTCCAGAAGGTGTCACCCCTGAAAGCCTTGACATGACTGAGCAGTATGGTATAACATTGAAGAGACTTACTCCTCTCTGTGCCATTCCAATTTCAGTATAA 1515 0.5135 MELHILLLLITLSLLPTIILRSILNCRRQTNRPPGPPGLPIIGNLHQLGPKPHVTLSTLSKTYGPLMSLQLGSVTVVIASSPSAAQEILQRHDSSFSDRPIPDVITAQPNVLDTLAWSPGGPRWRSRRRLCTTKIFTNQRLDLLQHLRQHKVQQLVQHLHQKSAARTPVNIGEVAFATMLNLVSNTVFSEDVVDPEFKSAGEFKEVVWRIMEDAGRVNVSDYFPAVKWLDLQGVKRHVTVSYLRIHKLFDEMIGKRVRDRDTCGARGDDFLDVLLDQCEQQEDDNNDDSESLTIDNIKPMLLDLFIAGSDTSGSTIEWAMAELLHNPEIMHKARNELNQVIGTTNNQVKESDIPRLEYMEAIVKETLRLHPSVPLLLPYLAGNDVQVNGYTIHKGDQVLINAWSIGRDPQYWDDPLAFRPERFLRSKIDFKGRNFEYLPFGAGRRICPGLPLANRMITLVVAALVHSFEWKLPEGVTPESLDMTEQYGITLKRLTPLCAIPISV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30210g00032 504 CDD CYP76-like 60 501 - -
Stsc30210g00032 504 Pfam Cytochrome P450 33 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 503 - -
Stsc30210g00032 504 Gene3D Cytochrome P450 22 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Stsc30210g00032 504 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30210g00032 504 FunFam Cytochrome P450 76C4 24 500 - -
Stsc30210g00032 504 SUPERFAMILY Cytochrome P450 27 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30210g00032 Stsc-Chr30210 243292 246618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30210g00032 3 502 Cytochrome P450 AT2G45550 43.393 4.90e-149 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30210g00032 - - aip:107619366 750.355