Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30210g00015 ATGAAACTCCGAAAGCAACAACCTTTGTTTCTGTCCCTCGTCACCTTCATCTCTATCACCATTTCCACCATTGCCACCACCACCATCATCTCACCGGGGACAACTCTCTATGCTTCAAACACCAACCAATCATGGTCTTCTCCGAACAACACCTTTTCCCTCCGCTTCCACCCTCTCCAAACCACCCCACCTTCCTTCATCGCTGCCCTCCTACACTCCGGCGGAGCCCCCATTATCTGGTCTGCCGGATACTCCGCGCCCGTGGACTCCGGTGGATACCTCCGCCTCCTCCCAGACGGAAACCTTCGCCTGGTTAATGGCTCCGGTGCCACCGTGTGGGAGTCCAACACCACCAACAAAGGTGTCACCTCAGCAACGGTTCTTGAAAGTGGAAACTTTGTTCTCTCCAATGGAACTTCCCCTGTTTGGTCAAGCTTTGAGAACCCCACTGATACCATTGTTCCTTCTCAAAGTTTCAATCTTGGTATGTTTCTGAGATCTGGGGTGTACTCGTTATCACTCCAGAAATCTGGGAATCTTACCCTTAGTTGGAACAATAGTGTTCCTTATTGGGATCAAGGCTTCAACTTTTCAATGAGTGGTGTGAATTTGAGTTCACCTGTATTAGGGTTGAAATCTGTGGGGATTTTGGAGATAAGTGATCCTAATTTGACTTCACCTGTGGTTGTTGCCTACAGTAGTGACTATAATGAAGGAGGGAACAATGTGTTGAGGGTTTTGAAGCTTGATGATGATGGGAATTTGAGGGTTTATAGTTATTTGAAGGGTAGTGAAGTTGGGACTGTGAGTTGGGTTGCTGTTGAGGATCAATGTGAGGTTTTTGGTTATTGTGGGAACTATGGTGTGTGTAGTTACAATGATTTGAATTCAGAACCTCTTTGTGGCTGTCCATCTCAGAATTTTGAGATGGTTGATCCTAATGATGGTAGGAAAGGGTGTCAGAGGAAGGTGAAGCTTGAGGAATGTGTTGGGAAGGTTGCTATGCTGCAATTGGATCATGCAAAATTCTTGACATACCCTCCTGTGTTTGTTGTTAATCCTGAGATATTTTTCATTGGTATATCAGCTTGTAGTGGAAATTGTCTTGCTGCTAGTTCTTGTTTTGCTTCCACTTCCTTAGCAGATGGAACCGGATGGTGTTACATTAAGACGACGAATTTCATCAGTGGATACCGGAACCCTGCCCTGCCTAGCACTTCCTTCATCAAGGTTTGTCCCCCTGTAGCTCCAAACTCGACGCCCTCTTCGGAGAATGATGTTGTTAAGAAGCATTGGAGGATTCATGGTTGGGTAGTAGCTTTAGTTGTTTTGAGTAGCCTTTTAGGTTTCCTTGCATTTGAGGGTGGTTTATGGTTGTGGTGTTGTAGGAATAGCCCGAGATTTGGAGGATTCTCTGCTCATTATGCTCTGCTTGAGTATGCATCTGGCGCACCAATCCATTTCTCCTACAAGGAACTTCAAAGGTCAACCAAGGGATTCAAGGAGAGGCTAGGTGATGGTGGATTCGGCGCTGTTTATAGAGGAACTCTTGCTAATAAAACTGTTGTTGCTGTGAAGCAACTAGAGGGAATTGAGCAAGGTGACAAACAGTTTAGGATTGAGGTTTCTACCATAAGTAGCACCCATCATTTGAATCTAGTGAGGTTGATTGGTTTCTGTTCCGAAGGGCGCCACCGGCTTTTGGTGTACGAGTTCATGAAAAATGGATCACTTGATAAATTCCTCTTTGTTGATGATGAACTACAATCAGGGAAATTATTGGATTGGGAGCATAGATTCAACATAGCCCTTGGCGCGGCCAGAGGCATGACATACCTTCATGAGGAGTGTAGAAACTGCATTGTCCATTGTGACATAAAGCCTGAAAACATTCTCCTAGATGAGAACTACAACGCAAAAATCTCGGATTTTGGCCTTGCAAAGCTCTCGAGTGCCACGAATCAAAGACACAGAACATTGACTAGTGTGAGAGGAACAAGAGGGTACTTAGCGCCGGAATGGCTTGCAAACCTTCCAATTACTTCGAAATCTGATGTGTACAGTTATGGTATGGTTTTGTTGGAGATAGTGAGTGGTAGAAGGAACTTTGAAGTCTCAGATGAAACAAACAGAAAAAAGTGTTCTATATGGGCCTATGAGGAGTTTGAGAAAGGTAACATAAGAGGTGTGATTGACAGGAGATTGGTTGGTGAAGAAGTGAACTTGGAGGAAGTAAAGAGATTGATTATGGCATGTTTTTGGTGCATTCAGGAGCAGCCATCACTGAGGCCAACAATGAGCAAGGTTGTTCAAATGCTAGAAGGTGTGACAGATATTGAAAATCCACCACCTCCAAAATCTGCTACACTAGGATTTTCTAGTGCAATTAACACCAATGTTGCAGATTCATCAGCTTCAACATGA 2424 0.4451 MKLRKQQPLFLSLVTFISITISTIATTTIISPGTTLYASNTNQSWSSPNNTFSLRFHPLQTTPPSFIAALLHSGGAPIIWSAGYSAPVDSGGYLRLLPDGNLRLVNGSGATVWESNTTNKGVTSATVLESGNFVLSNGTSPVWSSFENPTDTIVPSQSFNLGMFLRSGVYSLSLQKSGNLTLSWNNSVPYWDQGFNFSMSGVNLSSPVLGLKSVGILEISDPNLTSPVVVAYSSDYNEGGNNVLRVLKLDDDGNLRVYSYLKGSEVGTVSWVAVEDQCEVFGYCGNYGVCSYNDLNSEPLCGCPSQNFEMVDPNDGRKGCQRKVKLEECVGKVAMLQLDHAKFLTYPPVFVVNPEIFFIGISACSGNCLAASSCFASTSLADGTGWCYIKTTNFISGYRNPALPSTSFIKVCPPVAPNSTPSSENDVVKKHWRIHGWVVALVVLSSLLGFLAFEGGLWLWCCRNSPRFGGFSAHYALLEYASGAPIHFSYKELQRSTKGFKERLGDGGFGAVYRGTLANKTVVAVKQLEGIEQGDKQFRIEVSTISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDKFLFVDDELQSGKLLDWEHRFNIALGAARGMTYLHEECRNCIVHCDIKPENILLDENYNAKISDFGLAKLSSATNQRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSDETNRKKCSIWAYEEFEKGNIRGVIDRRLVGEEVNLEEVKRLIMACFWCIQEQPSLRPTMSKVVQMLEGVTDIENPPPPKSATLGFSSAINTNVADSSAST 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30210g00015 807 SMART serkin_6 498 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30210g00015 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 148 - -
Stsc30210g00015 807 Pfam Protein kinase domain 501 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30210g00015 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 195 IPR036426 -
Stsc30210g00015 807 PANTHER OS07G0415500 PROTEIN 11 785 - -
Stsc30210g00015 807 PIRSF SRK 3 807 IPR024171 GO:0004674
Stsc30210g00015 807 CDD STKc_IRAK 504 775 - -
Stsc30210g00015 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 149 273 - -
Stsc30210g00015 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 783 - -
Stsc30210g00015 807 SUPERFAMILY Protein kinase-like (PK-like) 481 774 IPR011009 -
Stsc30210g00015 807 ProSiteProfiles Protein kinase domain profile. 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30210g00015 807 FunFam S-receptor-like serine/threonine-protein kinase 472 572 - -
Stsc30210g00015 807 Gene3D - 147 272 IPR036426 -
Stsc30210g00015 807 ProSiteProfiles Bulb-type lectin domain profile. 150 270 IPR001480 -
Stsc30210g00015 807 Gene3D Transferase(Phosphotransferase) domain 1 573 782 - -
Stsc30210g00015 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Stsc30210g00015 807 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Stsc30210g00015 807 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Stsc30210g00015 807 Gene3D Phosphorylase Kinase; domain 1 472 572 - -
Stsc30210g00015 807 SMART blect_4 36 149 IPR001480 -
Stsc30210g00015 807 Pfam D-mannose binding lectin 78 160 IPR001480 -
Stsc30210g00015 807 Gene3D - 23 146 IPR036426 -
Stsc30210g00015 807 Pfam S-locus glycoprotein domain 236 304 IPR000858 GO:0048544
Stsc30210g00015 807 CDD B_lectin 39 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30210g00015 Stsc-Chr30210 115694 118320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30210g00015 474 783 Receptor kinase-like Gene Family AT5G20050 41.925 3.81e-79 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc30210g00015 Pkinase 6.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30210g00015 - - gmx:100810753 1227.62