Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30210g00014 ATGAAGTTTAACCCAAGAGTTTCGATCAGCCGCCGCAAGGCTTACTTCACGGCCCCGTTGAGGGTGCGGCTCGTTCTCCGAGCGCACTTCTCTCCGTCGACGCTCCAAGTGTACGGCCGCAAAAGGGTAATCCACATCGAGAAGGTTAATGGCTCCACCATCAATATCGGAATCTACCTTTCCAAGATTGTTATCACTAAGCTCTGCTTCAACAAGGACCGCGAGTCTCTCCTTGATTGTAAGGCGAAGGGCCGCGCCGCCACCGATAAGAAAAAGAAAGGTACCAAGTATGCTCCAGAAGATATCTTGCAGACCGTCGATTTAATTTACTCTCTCTCCTCCTCTCTTTATATTTAA 357 0.493 MKFNPRVSISRRKAYFTAPLRVRLVLRAHFSPSTLQVYGRKRVIHIEKVNGSTINIGIYLSKIVITKLCFNKDRESLLDCKAKGRAATDKKKKGTKYAPEDILQTVDLIYSLSSSLYI 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30210g00014 118 Gene3D - 26 103 IPR014722 -
Stsc30210g00014 118 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 35 96 IPR005756 GO:0003735|GO:0006412|GO:0015934
Stsc30210g00014 118 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 11 80 IPR005756 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30210g00014 Stsc-Chr30210 113924 114359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30210g00014 1 107 Cytoplasmic Ribosomal Protein Gene Family AT5G67510 46.259 8.08e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30210g00014 K02898 - gmx:100819391 115.931