Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30210g00012 ATGGAGCCTGTCTCTGCATCCACTTCAGCCACCAAGCCTGCAGAGGAGGCACCTCCCACCACACAACCTGCTCCACTCCGCAAGATCATGGTGGTGGCCACCATCGCCGCTGGCATACAGTTCGGCTGGGCCCTACAACTCACGCTACTCACACCTTACGTCCAAATGCTCGGAACCCCTCACATGTGGGTCTCCTTCATTTGGCTCTGCGGCCCTATCTCTGGCATTCTCGTCCAGCCTTTCGTTGGCTACCATAGCGACCGCTGTACTTCCCGCTTTGGCCGGCGTCGCCCATTCATCGCAGCCGGAACCCTAGCTGTTGCCTTTGCCGGCTTCCTCATCGCTTTCTCCGCCGACATAGGCCACCTCCTTGGCGACGACCTAGTCGCCACCGGAGAGAAGCACAAAATCCGTCCGCGCACCATCGGTGTCTTCATCCTCGGCTTCTGGATCATTGACTTTGCCAACAACATGCTCCAAGGACCGTGCCGTGCCCTCCTCGCCGACCTCGCCGCGGGGAAACAAAGCAAAACAAAAACCGCTTACGCACTCTACACGCTCTTCATGGCAATCGGAAACGTCCTCGGCTCCGCCGCAGGATCCTCCGAAGGCCTTTACAAAATTCTCCCGTTCACAACAACAAAAGCATGCCACAACGAGTGCGCGGACGTGAAAACCTGCTTTATGATCTCCGTGCTGTTACTGGTTGTTCTTGTAACTGTTAACTTGATCTACGTGAAGGAAAAACCGTTAACGGTTTCTATCGGAAAACGTGAGAAAGGTGGAATGAGGGAGTTATTGGGTGCGTTGCGGGAGCTTAAGAGGCCGATGCGGATCCTTTTATTGGTGACGTGTTTCAATTGGATTGCTTGGTTTCCGTTTTTTGAGTACAACACTGATTGGATGGGAGTTGAAGTGTACGGAGGAAGGGATAAAGATATGAATGTGTATGATTTGGGGATCCATGAAGGTGCTACCGGGATGATGTTAAATTCTATTGTGTCTGGTGGCGCGTCGTTGGGAATCGGTGTGTTGGCGCGTGGGCTTGGTGGTGAGAAGAAGCTCTGGGGTGTTGTTAACTTCTTGCTAGCCGTTTGTTTGGCCATGACTGTGCCTATTTCTAAGATGGCCAAACATTTACGACGATATGCTGCAGTGGGTGCTGGCGGCAGAGCCCTAGAGCCTCTTCCACCGCCCCGTGTCGTCAAGGCTGCTGCCTTAACTCTCTACGCCGTTCTTGGAATTCCTCTTGCTATCACTTACTGCATACCCTTTGCTCTAGCATCTATATTCTCCACCGACGCAGGAGCAGGACAAGGGCTATCTTTGGCCGTTCTCAATCTTGCAGTAGTCATACCACAGATGTTGATGTCTGCTGTTAGTGGACCATGGGACAAATTATTTGGTGGCAGTAACCTACCATCTTTTGTGGTGGGTTCCGTGGCGGCTGCAATCAGTGGCATATTGTCCATAACCTTGCTGCCATCTCCGCCGCGGGACGTCAAGGCTGCAATCACCGGAGGAGGCTTCCATTAA 1536 0.5299 MEPVSASTSATKPAEEAPPTTQPAPLRKIMVVATIAAGIQFGWALQLTLLTPYVQMLGTPHMWVSFIWLCGPISGILVQPFVGYHSDRCTSRFGRRRPFIAAGTLAVAFAGFLIAFSADIGHLLGDDLVATGEKHKIRPRTIGVFILGFWIIDFANNMLQGPCRALLADLAAGKQSKTKTAYALYTLFMAIGNVLGSAAGSSEGLYKILPFTTTKACHNECADVKTCFMISVLLLVVLVTVNLIYVKEKPLTVSIGKREKGGMRELLGALRELKRPMRILLLVTCFNWIAWFPFFEYNTDWMGVEVYGGRDKDMNVYDLGIHEGATGMMLNSIVSGGASLGIGVLARGLGGEKKLWGVVNFLLAVCLAMTVPISKMAKHLRRYAAVGAGGRALEPLPPPRVVKAAALTLYAVLGIPLAITYCIPFALASIFSTDAGAGQGLSLAVLNLAVVIPQMLMSAVSGPWDKLFGGSNLPSFVVGSVAAAISGILSITLLPSPPRDVKAAITGGGFH 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30210g00012 511 CDD MFS_SLC45_SUC 29 492 - -
Stsc30210g00012 511 PANTHER SUGAR TRANSPORTER 25 493 - -
Stsc30210g00012 511 MobiDBLite consensus disorder prediction 1 22 - -
Stsc30210g00012 511 MobiDBLite consensus disorder prediction 1 16 - -
Stsc30210g00012 511 SUPERFAMILY MFS general substrate transporter 29 499 IPR036259 -
Stsc30210g00012 511 Pfam MFS/sugar transport protein 38 290 - -
Stsc30210g00012 511 NCBIfam sucrose/proton symporter 25 499 IPR005989 GO:0005886|GO:0008515|GO:0015770
Stsc30210g00012 511 Gene3D MFS general substrate transporter like domains 27 259 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30210g00012 Stsc-Chr30210 95038 97132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30210g00012 1 511 Sucrose Transporter Gene Family AT1G71890 56.130 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30210g00012 K15378 - gmx:547679 648.662