Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30210g00011 ATGGACTCTGCCAATGATGCCACCAAACTTCCTCCTCCTCATGCGGAGGAACCCACGGTTGCTCCACCCACTCACCAGTCTAGCCCTCTACGTAAGATCATCACTGTCGCCACCCTCGCCATCGGCATTCAATTTGTGTGGGCCCTACAGCTAACCATACTCACACCCTACGTCCAAATTCTCGGAACCCCTCACATGTGGGTTTCCTTCATCTGGCTCTGCGGCCCTATCTCCGGCATCATCGTTCAGCCCCTCGTCGGTTTCTATAGCGACCGCTGCACCTCCCGCTTCGGCCCCCGCCGCCCCTTCATTATCGCCGGAACCCTATCTGTCGTCTTCGCCTCCTTCCTCGTTGGCTACGCTGCAGACATAGGCCATTCCCTCGGTAACTCCGACGAAGCAACCCTCCGCCCTCGCACCATTGCCGTCTTCATCATGGGCTTCTGGATCATCGACTTCGCCAACAACCTCCTCCAGGGACCGTGCCGCGCCTTCATCGCCGACCTCGCCGCCGGCCACCACAGCAAGACCAGAACCGGCTACGCCTTCTACACGCTCTTCACAGCCGTCGGCAACATCCTCGGCTCCGCGGCGGGATCATACGGTGGAATCCACCGCGTGCTACCGTTCACAAAAACGACATCGTGCGACGAGTACTGCGCAGACGTGAAGACGTGCTTCCTCTTCGCTTCTGCGATTCAGTTAGCGCTGGTAACCATTTCTGCCACGTACGTTAAGGAGAAGCCGTTAAGAATAACAGATTCAGTTGGAAATGGCGGGAAGGGAGGGATTGGGGAATTATTCGGTGCTTTGCGGGAACTCAAGAGACCAATGTGGATCGTATTGTTGGTGACGTCATTCAACTGGTTTGCGTGGTTTCCGTTTTTACTTTACAACACGGATTGGATGGGGGTTGAAGTTTACGGTGCGCAGGATAAGAAGGAGAGAGTGTACACTATGGGGGTCCACGCGGGTGCGTTGGGAATGATGTTGAATTCCGTTGTGGCGGGTGCCGCCTCGTTGGGAATTGGCGCGTTGGCGCGTGGGTTTCGCGGCGAGAAGAGGCTATGGGGAGTTGTTAACTTCTTGCTGGCGGTTTGTTTGGCCATGACGGTGGTGGTTTCTAAGATGGCTGGGCATTCTCGACGGTATGCGGTGGGTAATGACGGGTTTAGGGACCCACTTCCGCCTCCGGCAGGAGTAAAGGCAGCTGCGTTGACTCTTTACTCCGTGCTTGGACTGCCTTTTGCGGTAACTTGTAGCATACCCTATACTCTAGCTTCTATATTCTCCAGCGCGGCAGGGGCAGGCCAAGGGCTATCCCTTGCAATTCTGAATCTTGCAGTTGTCATACCACAGATGGTGATGTCTCTGGTTAGCGGACCCTGGGATAAACTCTTTGGTGGTAACTTGCCAGCGTTTGTGTTGGGTGCTGTTGCAGCTGCAATCAGTGGCATACTATCATTACTGTTCCTTCCTTCTCCCCCGCCGGATTTCACCAAACCTGCTACTGTAACACACAACACTGTTTGA 1533 0.5506 MDSANDATKLPPPHAEEPTVAPPTHQSSPLRKIITVATLAIGIQFVWALQLTILTPYVQILGTPHMWVSFIWLCGPISGIIVQPLVGFYSDRCTSRFGPRRPFIIAGTLSVVFASFLVGYAADIGHSLGNSDEATLRPRTIAVFIMGFWIIDFANNLLQGPCRAFIADLAAGHHSKTRTGYAFYTLFTAVGNILGSAAGSYGGIHRVLPFTKTTSCDEYCADVKTCFLFASAIQLALVTISATYVKEKPLRITDSVGNGGKGGIGELFGALRELKRPMWIVLLVTSFNWFAWFPFLLYNTDWMGVEVYGAQDKKERVYTMGVHAGALGMMLNSVVAGAASLGIGALARGFRGEKRLWGVVNFLLAVCLAMTVVVSKMAGHSRRYAVGNDGFRDPLPPPAGVKAAALTLYSVLGLPFAVTCSIPYTLASIFSSAAGAGQGLSLAILNLAVVIPQMVMSLVSGPWDKLFGGNLPAFVLGAVAAAISGILSLLFLPSPPPDFTKPATVTHNTV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30210g00011 510 PANTHER SUGAR TRANSPORTER 29 491 - -
Stsc30210g00011 510 MobiDBLite consensus disorder prediction 1 26 - -
Stsc30210g00011 510 CDD MFS_SLC45_SUC 33 490 - -
Stsc30210g00011 510 Gene3D MFS general substrate transporter like domains 28 503 IPR036259 -
Stsc30210g00011 510 NCBIfam sucrose/proton symporter 29 497 IPR005989 GO:0005886|GO:0008515|GO:0015770
Stsc30210g00011 510 Pfam MFS/sugar transport protein 40 293 - -
Stsc30210g00011 510 SUPERFAMILY MFS general substrate transporter 33 496 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30210g00011 Stsc-Chr30210 91545 93935 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30210g00011 2 498 Sucrose Transporter Gene Family AT1G22710 56.607 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30210g00011 K15378 - gmx:547679 637.876