Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30210g00010 ATGGACAACCTTTCTTCCACCAAGCATAACCACAATTCTTCCAAGCCTAATACTCTCCACGTAGAGGATCCGGCTGCTCTAACAGAGCCGAGTCCTCTACGTAAGATCATCGTCGTGGCATCTATTGCCGCGGGTGTTCAGTTTGGATGGGCTTTACAGCTCTCCCTACTGACACCCTACGTCCAACTGCTTGGCATCCCACATACTTGGGCCGCTTTCATCTGGCTATGCGGCCCAATAAGTGGGATGCTCGTGCAGCCTATAGTAGGTTACTATAGTGACCGCAGCACGTCGCGGTTTGGACGTCGGCGTCCTTTCATTGCTGCCGGCTCCTTCGCCGTTGCCATCGCAGTGTTCCTTATTGGCTACGCCGCTGACATGGGACACATGTTCGGCGACTCGCTCCAGAAGAAGTCCCGCCCGCGCGCCATAGCTATCTTCGTCGTCGGCTTCTGGATCCTTGACGTGGCCAACAACATGCTCCAGGGTCCATGCCGGGCACTCCTCGCCGACCTCGCCGCCGGAGACCAGCGGAAGACGCGGACAGCCAACGCCGGCTTCTCCTTCTTCATGGCGGTTGGAAACGTGCTCGGATACGCCGCCGGTTCCTACAGCGGCCTCCACCACATCTTTCCGTTCACGAAAACAAAAGCGTGCGATGTCTACTGCGCAAATCTCAAAAGCTGCTTCTTCCTCTCAATCGCGATGTTGCTAACCCTAGCCACGGCAGCGTCGATCTACGTAAAAGAGAAGCCACTGTCGCCGGAGAAATCAACGGCGGCGGACGCGGAGGACGAAGGCAAATCACACGGCATACCTTGCTTCGGAGAATTGTCCGGCGCGTTCCGCGAATTGAAGAGGCCGATGTGGATCTTGTTGCTGGTGACGTGCCTGAATTGGATCGCGTGGTTCCCGTTCTTGCTCTTCGACACCGATTGGATGGGGAGAGAAGTGTACGGCGGAGAGGTTGGTGTTGGCAAGGCATACGATATGGGAGTTCGCGCCGGAGCCTTAGGGCTGATGTTGAACTCGGTGGTGCTCGGAGCGACGTCGGTGGGGGTGGAGTTCTTGGCGCGTGCGGTTGGTGGAGTTAAGAGGCTTTGGGGAATCGTGAACTTCATTCTTGCGATTTGTCTTGCAATGACGGTTTTGGTTACTAAGCAAGCTGAGCACTCGCGCCACTTCGCGCCTGGTTCAACGGACCCTCTTCCGCCGCCCGGTAACGTTAAGGCCGGCGCTTTGGCTCTCTTCTCCGTTCTCGGAATTCCTCTCGCGATCACTTACAGCATACCCTTTGCTCTAGCATCTATATTCTCTAGCTCCACAGGAGCAGGACAAGGGTTATCTCTAGGAGTTCTCAATCTTGCAATTGTCATACCACAGATGGTAATTTCTGTAACTAGTGGACCATGGGATGCTCTGTTTGGTGGTGGTAACTTGCCAGCATTTGTGGTGGGAGCAGTGGCAGCATTAGCTAGTGGCATATTATCCATATTCCTGCTACCATCTCCGCCGCCGGATTTGGCCAAGGCCGCAACCGCAGCCGGAGGAGGCTTCCATTAA 1563 0.5547 MDNLSSTKHNHNSSKPNTLHVEDPAALTEPSPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYYSDRSTSRFGRRRPFIAAGSFAVAIAVFLIGYAADMGHMFGDSLQKKSRPRAIAIFVVGFWILDVANNMLQGPCRALLADLAAGDQRKTRTANAGFSFFMAVGNVLGYAAGSYSGLHHIFPFTKTKACDVYCANLKSCFFLSIAMLLTLATAASIYVKEKPLSPEKSTAADAEDEGKSHGIPCFGELSGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGEVGVGKAYDMGVRAGALGLMLNSVVLGATSVGVEFLARAVGGVKRLWGIVNFILAICLAMTVLVTKQAEHSRHFAPGSTDPLPPPGNVKAGALALFSVLGIPLAITYSIPFALASIFSSSTGAGQGLSLGVLNLAIVIPQMVISVTSGPWDALFGGGNLPAFVVGAVAALASGILSIFLLPSPPPDLAKAATAAGGGFH 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30210g00010 520 MobiDBLite consensus disorder prediction 1 21 - -
Stsc30210g00010 520 FunFam Sucrose transport protein 30 501 - -
Stsc30210g00010 520 Gene3D MFS general substrate transporter like domains 29 498 IPR036259 -
Stsc30210g00010 520 CDD MFS_SLC45_SUC 36 499 - -
Stsc30210g00010 520 NCBIfam sucrose/proton symporter 32 506 IPR005989 GO:0005886|GO:0008515|GO:0015770
Stsc30210g00010 520 PANTHER SUGAR TRANSPORTER 33 500 - -
Stsc30210g00010 520 Pfam MFS/sugar transport protein 44 302 - -
Stsc30210g00010 520 SUPERFAMILY MFS general substrate transporter 34 505 IPR036259 -
Stsc30210g00010 520 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30210g00010 Stsc-Chr30210 64041 67779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30210g00010 27 520 Sucrose Transporter Gene Family AT1G22710 70.200 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30210g00010 K15378 - gmx:547679 865.144