Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30210g00006 ATGATTTTGGACCAAAAGCTTTGCCCTTTTGTGCTTTTCAATTCTTTTGCACTGATGGGTACCTCGAATCTTCTCTTCTTTCTCTTCTCTCTATTGGGTTTGTGTGCTTTGTCAGCTGCCAAAGTGGTGCTGATTGGGAACAACATCACTCTCTCCTTCGATGATATTGAAGCTAATTTCGCTCCGACGATCAAAGGGTCTGGAGAATGTGGATTCTTATATTTGGCAGAGCCGCTAGATGCTTGCTCCGACCTGACTAACCCAGCTCCACAACTTCCGAATGCGAGTTTGCCTTTTGTTTTGATGATTAGGGGAGGATGCAGCTTTGAGGAAAAGGTCAGAAGAGCACAAGCAGCTGGCTACAAAGCTGCAATTGTCTACGATGATGAGGATAGTGGTGTCTTGGTTGCAAGTAATCACCAATTCTTATGTGCAACAGCGTATTGTTGTTTATCATTCTCTTCCTTCATGCAATTTGCATTACGCTTGGTTTTATCTACTGATAATGTGAGTCATCAAATTCAGTCACTGGTTGTGGCAACAAAATTTTAA 552 0.4239 MILDQKLCPFVLFNSFALMGTSNLLFFLFSLLGLCALSAAKVVLIGNNITLSFDDIEANFAPTIKGSGECGFLYLAEPLDACSDLTNPAPQLPNASLPFVLMIRGGCSFEEKVRRAQAAGYKAAIVYDDEDSGVLVASNHQFLCATAYCCLSFSSFMQFALRLVLSTDNVSHQIQSLVVATKF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30210g00006 183 Pfam PA domain 99 133 IPR003137 -
Stsc30210g00006 183 Gene3D - 39 145 - -
Stsc30210g00006 183 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 40 149 - -
Stsc30210g00006 183 CDD PA_C_RZF_like 35 141 IPR044744 -
Stsc30210g00006 183 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 73 132 - -
Stsc30210g00006 183 SUPERFAMILY PA domain 100 132 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30210g00006 Stsc-Chr30210 47331 48504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30210g00006 37 137 C3H Transcription Factor Family AT1G22670 52.475 1.97e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30210g00006 K15692 - gmx:100793048 187.193