Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30210g00005 ATGATTTTGGACCAAAAGCTTTGCCCTTTTGTGCTTTTCAATTCTTTTGCACTGATGGGTACCTCGAATCTTCTCTTCTTTCTCTTCTCTCTATTGGGTTTGTGTGCTTTGTCAGCTGCCAAAGTGGTGCTGATTGGGAACAACATCACTCTCTCCTTCGATGATATTGAAGCTAATTTCGCTCCGACGATCAAAGGGTCTGGAGAATGTGGATTCTTATATTTGGCAGAGCCGCTAGATGCTTGCTCCGACCTGACTAACCCAGCTCCACAACTTCCGAATGCGAGTTTGCCTTTTGTTTTGATGATTAGGGGAGGATGCAGCTTTGAGGAAAAGGTCAGAAGAGCACAAGCAGCTGGCTACAAAGCTGCAATTGTCTACGATGATGAGGATAGTGGTGTCTTGGTTGCAAAAAGAATCATGAAATCATCTTCATTGTTCTACCTAGTAGTGACATACTTTCTCCACTGA 471 0.4374 MILDQKLCPFVLFNSFALMGTSNLLFFLFSLLGLCALSAAKVVLIGNNITLSFDDIEANFAPTIKGSGECGFLYLAEPLDACSDLTNPAPQLPNASLPFVLMIRGGCSFEEKVRRAQAAGYKAAIVYDDEDSGVLVAKRIMKSSSLFYLVVTYFLH 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30210g00005 156 CDD PA_C_RZF_like 35 131 IPR044744 -
Stsc30210g00005 156 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 73 131 - -
Stsc30210g00005 156 SUPERFAMILY PA domain 100 133 IPR046450 -
Stsc30210g00005 156 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 40 153 - -
Stsc30210g00005 156 Pfam PA domain 99 131 IPR003137 -
Stsc30210g00005 156 Gene3D - 39 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30210g00005 Stsc-Chr30210 46652 48504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30210g00005 37 137 C3H Transcription Factor Family AT1G22670 52.475 1.37e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30210g00005 K15692 - gmx:100793048 187.193