Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30209g00092 ATGATTCAAAACCTTGTTGAGTTTTACAACAAGCCCCAACAAACACTAGCCAAGCTTGCTAAGCTTCATGCCCCAGACATAATGCTTCTAAATCTTGGTTTTCAATCATCAACTACCATAATCATCTCTTCACCAAACATTGCCAAAGAAGTCCTCCAAACCAATGATTTGTTGTTCTCCGATCGAATGGTTCCGGCTATCGTAACTGCTCTTGATCACCACAACTTTAGCTTGCCCTTCTTACCGGTTTGTCCACTTTGGAAAGATCTAAAGAAAATATGCAATGAACAATTGTTTTCTACCAAAGTCCTTGACGGAAGTCAAGGGCTTCGGCAAAAGAAGCTTCTAGATCTTCTTACCGACGTGCGAAAATACTGCCGGACCGGTGAAGCTGTTGATGTTGGGAGAGCGGCTTTTAGGGCATGCATAAATTTCTTGTCCTATACTTTTGTGTCTGAGGATTTTGTCGAATCTGTGGAGAATGAGAAGGAAGAGTACAAAGATATGGTTTCTACTCTCTTGAAACTATCTGGAACAGCAAATGTGGTTGATGTTTTTCCGGTGTTAAAGGTACTTGATCCACAAGGGCTTCAAAGGAACTCCGCTCAATACATTACCATGTTTTTCCATAGATTGGATGAGTTGATTGATAAACGGTTGAAGGTAAGAGAAGAGGAGAATTATGTCACAAACAATGACATGTTGGACACACTTCTTGATATTTCTCATCAGGATAGTCAGAGGATGGATAGAGAAAAGATCAAACATTTTTTGCTGGATCTACTTGTAGCTGGAACAGATACCACTGCATTTGGATTAGAAAGAGCAATGACGGAATTACTTCATAGCCCAAAGGCCATGTCAAAAGCCAAACAAGAATTAGAACAAATCATTGGAAAAAGTAACCCTATTAAGGAATCCGATGTTTCTAAACTGCCATACTTACAAGCCATAGTAAAAGAGACACTAAGATTGTATCCGCCAGCTCCACTTTTACTCCCAAGGAAAGCAAAAATTGATGTTGAAGTTTCAGGTTACACAATCCCAGAGGGTGCAAGAGTTCTAATAAATGCATGGGCTATGGGTAGAAACCCTAATATATGGGAGGATGCACATTTGTTTTTGCCAGAGAGGTTTTTGGGGTCTAATATTGATGTTAAAGGAAGAGATTTTCAACTCACACCGTTTGGTAGTGGGAGAAGGATTTGTCCAGGTGCACCACTTGCTGTTAGAATGATGCATGTGATGTTGGGATCATTGATCAATTCTTTTGATTGGAAACTTGAAAATAATATCAAGCCTGAGGATATGAACATGGATCAACCCCTCCGAGCTATTCCACTTGAACCAAACAATTAA 1359 0.3988 MIQNLVEFYNKPQQTLAKLAKLHAPDIMLLNLGFQSSTTIIISSPNIAKEVLQTNDLLFSDRMVPAIVTALDHHNFSLPFLPVCPLWKDLKKICNEQLFSTKVLDGSQGLRQKKLLDLLTDVRKYCRTGEAVDVGRAAFRACINFLSYTFVSEDFVESVENEKEEYKDMVSTLLKLSGTANVVDVFPVLKVLDPQGLQRNSAQYITMFFHRLDELIDKRLKVREEENYVTNNDMLDTLLDISHQDSQRMDREKIKHFLLDLLVAGTDTTAFGLERAMTELLHSPKAMSKAKQELEQIIGKSNPIKESDVSKLPYLQAIVKETLRLYPPAPLLLPRKAKIDVEVSGYTIPEGARVLINAWAMGRNPNIWEDAHLFLPERFLGSNIDVKGRDFQLTPFGSGRRICPGAPLAVRMMHVMLGSLINSFDWKLENNIKPEDMNMDQPLRAIPLEPNN 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30209g00092 452 SUPERFAMILY Cytochrome P450 2 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 Gene3D Cytochrome P450 1 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 441 - -
Stsc30209g00092 452 Coils Coil 156 176 - -
Stsc30209g00092 452 FunFam Geraniol 8-hydroxylase 205 448 - -
Stsc30209g00092 452 Pfam Cytochrome P450 3 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 396 405 IPR017972 GO:0005506|GO:0016705
Stsc30209g00092 452 PRINTS P450 superfamily signature 403 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 PRINTS P450 superfamily signature 264 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 PRINTS P450 superfamily signature 394 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 PRINTS P450 superfamily signature 317 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 PRINTS E-class P450 group I signature 273 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 PRINTS E-class P450 group I signature 393 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 PRINTS E-class P450 group I signature 47 68 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 PRINTS E-class P450 group I signature 357 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 PRINTS E-class P450 group I signature 403 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 PRINTS E-class P450 group I signature 316 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00092 452 PRINTS E-class P450 group I signature 253 270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30209g00092 Stsc-Chr30209 785908 787853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30209g00092 1 441 Cytochrome P450 AT2G45550 39.775 1.61e-120 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30209g00092 - - aip:107612182 799.275