Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30209g00091 ATGCAAAACCTTGTTGAGTTTTGCAACAAGCCCCAACAAACCCTAGCCAAGCTTGCTAAGCTTCATGCCCCAGACATAATGCTTCTAAAGCTTGTTGTTCAACCATCAACTACCATAATCATCTCTTCACCAAAAATTGCCAAAGAAGTTCTCCAAACCAATGATTTGTTGTTCTCCGATCGAACGGTTCCGTCTATAGTAACCGCTCACGATCACCACAATTATAGCTTGCCCTTCTTACCGGTTTGCCCACTTTGGAAAGATCTAAGAAAAATATGCACCGAACAATTATTCTCCACCAAAGTCCTTGACTCGAGTCAAGGCCTTCGGCAAAAGAAGCTTCTAGATCTTCTTAATGATATGCGAAAATACAGTCAAACCGGTGAAGCTATTGATGTAGGGCATGCTGCTTTTAGGGCATGCATAAATTTCTTGTCCTATACTTTTGTGTCCGAGGATTTTGTTGATTCCGTAGAGAATGGAGAGTATAAGGACATTGTTTCCACTCTCTTGAAACTATCTGGAACAGCAAATGTGGTTGATGTTTTTCCGGTCTTGAAGTTGTTTGATCCACAAGGGCTTCAAAGGAACACCACTAATTACATTACCATGTTTTTCCATAGATTGGACAAGTTGATCGATAAAAGGTTGAAGCTAAGAGAAGAGGAGAATTATGTCACAAATAATGACATGTTGGACACACTCCTTGATATTTCTCATCAAGATAGCCAGAAGATGGATAGAGAAAAGATCAAACATTTTTTGCTGGATCTACTTGTTGCTGGAACAGATACCACTGCATATGGATTAGAAAGAGCAATGACTGAATTGCTTCATAATCCAAAGGTCATGTCAAAAGCCAAACATGAATTAGAACAAATCATTGGAAAAGGTAACACAATTGAGGAATCCGATGTTGTTAAACTTCCATACTTACAAGCCATAATAAAAGAGACACTAAGATTGCATCCACCAGCTCCACTTTTGCTCCCAAGGAAAGCAAAAATTGATGTTGAAATCTCAGGATACACAATCCCAAAGGGTGCAAGAGTTCTAATAAATGCATGGGCTATTGGTAGAAACCCTAATATATGGGAAGATGCACATTTGTTTTTGCCAGAGAGGTTTTTGGGGTCTAATATTGATGTTAAAGGAAGAGATTTTCAGCTCACACCCTTTGGTAGTGGGAGAAGGATTTGTCCAGGTTCACCACTTGCTATTAGAATGATTCATGTGATGTTGGGATCATTGGTCAATTCTTTTGATTGGAAACTTGAAAATAATATCAAGCCTGAGGATATGGACATTGATCAACCCCTCCGAGCTATTCCACTTGAACTAAATAATTAG 1350 0.3904 MQNLVEFCNKPQQTLAKLAKLHAPDIMLLKLVVQPSTTIIISSPKIAKEVLQTNDLLFSDRTVPSIVTAHDHHNYSLPFLPVCPLWKDLRKICTEQLFSTKVLDSSQGLRQKKLLDLLNDMRKYSQTGEAIDVGHAAFRACINFLSYTFVSEDFVDSVENGEYKDIVSTLLKLSGTANVVDVFPVLKLFDPQGLQRNTTNYITMFFHRLDKLIDKRLKLREEENYVTNNDMLDTLLDISHQDSQKMDREKIKHFLLDLLVAGTDTTAYGLERAMTELLHNPKVMSKAKHELEQIIGKGNTIEESDVVKLPYLQAIIKETLRLHPPAPLLLPRKAKIDVEISGYTIPKGARVLINAWAIGRNPNIWEDAHLFLPERFLGSNIDVKGRDFQLTPFGSGRRICPGSPLAIRMIHVMLGSLVNSFDWKLENNIKPEDMDIDQPLRAIPLELNN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30209g00091 449 PRINTS P450 superfamily signature 391 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 PRINTS P450 superfamily signature 261 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 PRINTS P450 superfamily signature 314 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 438 - -
Stsc30209g00091 449 SUPERFAMILY Cytochrome P450 3 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 PRINTS E-class P450 group I signature 270 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 PRINTS E-class P450 group I signature 390 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 PRINTS E-class P450 group I signature 250 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 PRINTS E-class P450 group I signature 354 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 PRINTS E-class P450 group I signature 400 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 PRINTS E-class P450 group I signature 313 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 PRINTS E-class P450 group I signature 46 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 Gene3D Cytochrome P450 1 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 FunFam Geraniol 8-hydroxylase 202 445 - -
Stsc30209g00091 449 Pfam Cytochrome P450 3 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00091 449 CDD CYP76-like 19 444 - -
Stsc30209g00091 449 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 393 402 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30209g00091 Stsc-Chr30209 779380 782622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30209g00091 3 438 Cytochrome P450 AT2G45550 40.950 5.21e-124 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30209g00091 - - aip:107612182 803.512