Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30209g00037 ATGGTAATCTTTAGATCTTCATTGCTGCAATCTCTCGAATCCGAAGCAGTCTTACATAAGACACAAAAACTGACTAACAAAGACATCATTGGGTCTGGTGGCTATGGAGTTGTTTATGAACTAAGGCTAAATGAATCTTTAGCCTTCGCCGTGAAGAGGCTGAACCGCGGAACAAAAGAGAGGGACAATGGTTTTGAGAGAGAGTTGGAGGCGATGGCGGACATAAAGCATCGAAACATTGTAACTCTTCATGGATACTACACTGCACCACACTACAATCTTCTTATATATGAGCTAATGCCAAATGGAAGTTTGGATTCCATTTTGCATGGGAGATCAAAGGAGAAGAAGCATTTGGATTGGCCAACAAGATATAGAGTAGCTGTAGGTGCTGCTAGAGGAATATCATATCTTCACCATGATTGCATCCCTCACATTATCCACAGAGATATCAAATCAAGCAACATATTGCTGGATCAAAACATGGAGGCAAGAGTTTCTGACTTCGGATTAGCCACGTTGATGGAGCCGAATAAGACTCATGTTTCGACAATTGTGGCAGGAACTTTCGGATACTTGGCACCTGAATATTTCGATACGGGAAGAGCAACGGTTAAGGGCGATGTTTACAGCTTTGGAGTGAAGGCTGTTGTTCAGGAGAAGAAAGAGGAGGTAGTTCTTGACAGTAGCTTAGGGTCTTCTTGTCCAATGCAAGAGGTAAACAAGGTTTTCAGCATTGCAATGATGTGTCTTGAACCAGACCCCTTGAATAGACCCAACATGGCTGAGGTTGTCAACTTGCTTGAACAAGCAGTATCAGGAAAACATGTTACTACACCTAATGACATTTCACTCTAA 858 0.4231 MVIFRSSLLQSLESEAVLHKTQKLTNKDIIGSGGYGVVYELRLNESLAFAVKRLNRGTKERDNGFERELEAMADIKHRNIVTLHGYYTAPHYNLLIYELMPNGSLDSILHGRSKEKKHLDWPTRYRVAVGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMEARVSDFGLATLMEPNKTHVSTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVKAVVQEKKEEVVLDSSLGSSCPMQEVNKVFSIAMMCLEPDPLNRPNMAEVVNLLEQAVSGKHVTTPNDISL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30209g00037 285 FunFam Receptor-like serine/threonine-protein kinase 1 99 - -
Stsc30209g00037 285 SUPERFAMILY Protein kinase-like (PK-like) 13 269 IPR011009 -
Stsc30209g00037 285 Gene3D Phosphorylase Kinase; domain 1 4 99 - -
Stsc30209g00037 285 SMART serkin_6 24 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30209g00037 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Stsc30209g00037 285 Gene3D Transferase(Phosphotransferase) domain 1 100 280 - -
Stsc30209g00037 285 FunFam Lectin-domain containing receptor kinase A4.3 100 220 - -
Stsc30209g00037 285 Pfam Protein tyrosine and serine/threonine kinase 25 268 IPR001245 GO:0004672|GO:0006468
Stsc30209g00037 285 PANTHER OS01G0750732 PROTEIN 20 273 - -
Stsc30209g00037 285 ProSiteProfiles Protein kinase domain profile. 24 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30209g00037 285 ProSitePatterns Protein kinases ATP-binding region signature. 30 52 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30209g00037 Stsc-Chr30209 275800 277124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30209g00037 14 272 Receptor kinase-like Gene Family AT2G35620 45.105 3.00e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Stsc30209g00037 PK_Tyr_Ser-Thr 6.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30209g00037 - - ahf:112703495 501.13