Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30209g00031 ATGAGCATGATAAGGGTATCTTCCCCAACTGCAATATGGTGTATCATAGTGGTTTCTTTGGTTCTTCTATGTACATGGAAGCTTCTCAATCGGCTATGGCTGAGACCAAAGAGATTGGAGAAACTACTAAGAGCTCAGGGACTTGAGGGCAATAAATATAGGGTTCTTGTTGGGGATTCAATGGAGATGCAGAAGATGATCAAGGAAGGAGCCAAATCTCAACAACAAAACAGTCTCTCTAATGACAAAGATGTAGCTCCTCGTGTCTTCTCTTTCATCCATCACACTGTCCACAAATTTGGTAAGAATTCTTTTGTATGGGAAAGTCGAACGCCAAAAGTCATAATCACAAACCCTCAACAAATCAAAGAAGTCTTTAACAACATGAATGACTTCGAGAAACCCCAGTTGAGCCCTCTTATCATGTCATTGGCCACCGGACTCATATCTTATGAGGGCGAGAAATGGCAAAAACATCGAAAGATTATCAACCCTGCCTTCCATCTTGAAAAACTAAAGGTATTGTCGCCAACCATACTCCAATGTTGTGATGAAATGGTTAGAAAATGGAACGGGATGCTATCTTCGGATGGAAAATGTGAAATAGACATATGGCCTTTTCTACAAAATTTGACTGGCGATATTATTTCCAAGACAGCATTTGGAAGCAGTTATGAAGAAGGAAAAAGAATATTCCATCTTTTAAAAGAGCAAGGTGGACTTATTATGAAATTACATTATGCCTTTATTCCAGGATCATGGTTGCTGCCAACAGCTACAAACAAGAGGATGAGAGAAATTAGAAAAGAGATAGAAGCTTCAATCAAGGTTATCATCAACGAAAGAGAGAAAGCAATGAAGGCAGGGGAAGTCATGAACAGAGACTTAATAGGCTTACTTTTGGAATCAAATCTTAGAGAAATACAAGAACATGGAAACCATAAAGTTGTTGGAATGACAATCCAAGAAGTAATTGAGGAGTGCAAATTATTCTACCTTGCTGGCCAAGAAACCACCTCGGTTCTTCTAGTTTGGTCAATGGTACTATTGAGTAGGTATCCTGATTGGCAAGATCGCGCTAGAGAAGAAGTTTTGCAAGTTTTCAGTGATCGAGAACCAAATTATGAAGGGTTAAATCACCTTAAAATTATGACAATGATTTTATATGAGGTTCTAAGGTTATACCCTCCAAATGTTTATTTCAATCGTGCTGTTCAAAAAGATGTGAAACTTGGCAACCTTTTCCTTCCAGCAGGAGTACAAGTTTCCATGCCAATACTCTTGATTCATCAGGATCGGGATATTTGGGGCGACGATGCAACAGAGTTCAAGCCGGAAAGATTTTCCGAAGGAGTTTCAAAGGCAACAAAAGGGCAAGTTTCATTCTTTCCATTTGGATGGGGTCCTAGGATATGCATTGGCCAAAATTTTGCTTTAATGGAAGCAAAGATAATTTTGTCATTGCTTTTACAACGTTTCTCATTTGAGCTTTCCCCATCCTATACACATGCTCCAACTACTGTACTTACTCTCAATCCAAAGCATGGTGCTCATGTTATCATACATAAACTGTAG 1575 0.3898 MSMIRVSSPTAIWCIIVVSLVLLCTWKLLNRLWLRPKRLEKLLRAQGLEGNKYRVLVGDSMEMQKMIKEGAKSQQQNSLSNDKDVAPRVFSFIHHTVHKFGKNSFVWESRTPKVIITNPQQIKEVFNNMNDFEKPQLSPLIMSLATGLISYEGEKWQKHRKIINPAFHLEKLKVLSPTILQCCDEMVRKWNGMLSSDGKCEIDIWPFLQNLTGDIISKTAFGSSYEEGKRIFHLLKEQGGLIMKLHYAFIPGSWLLPTATNKRMREIRKEIEASIKVIINEREKAMKAGEVMNRDLIGLLLESNLREIQEHGNHKVVGMTIQEVIEECKLFYLAGQETTSVLLVWSMVLLSRYPDWQDRAREEVLQVFSDREPNYEGLNHLKIMTMILYEVLRLYPPNVYFNRAVQKDVKLGNLFLPAGVQVSMPILLIHQDRDIWGDDATEFKPERFSEGVSKATKGQVSFFPFGWGPRICIGQNFALMEAKIILSLLLQRFSFELSPSYTHAPTTVLTLNPKHGAHVIIHKL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30209g00031 524 CDD CYP72 90 520 - -
Stsc30209g00031 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Stsc30209g00031 524 Gene3D Cytochrome P450 79 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00031 524 FunFam Cytochrome P450 734A1 33 524 - -
Stsc30209g00031 524 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00031 524 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00031 524 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00031 524 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00031 524 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00031 524 Pfam Cytochrome P450 89 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00031 524 SUPERFAMILY Cytochrome P450 88 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00031 524 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00031 524 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00031 524 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00031 524 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00031 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 23 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30209g00031 Stsc-Chr30209 240629 248220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30209g00031 16 524 Cytochrome P450 AT3G14690 53.620 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30209g00031 - K17873 gmx:102667924 763.837