Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30209g00030 ATGATAAAAGTATCTTCCCCAACTGCAATATGGTGGATCATAGTGGTTCCTTTGGTTCTTCTATGTGCATGGAAGCTTCTGAATTGGGTATGGCTGAGGCCAAAGAGATTGGAGAAGCTTCTAAGAGCTCAGGGACTTGAGGGCAACAAATACAGGGTTCTTGTTGGGGATTCAATGGAGATGTTCAAGATGATCAAGGAAGGTGCCAAATCTCAACAACACAACACTCTCTCTAATGACAAAGATGTAGCCCCTCATGTCTTCTCTTTCATCCATCACACTGTCAACAAATTCGGTAAGAATTCTTTTGTATGGGAAGGTGCAACACCAAAGGTCATAATTACAAACCCTGATCAAATCAAAGAAGTATTTAACAAGATCAATGACTTCAAGAAACCCAAGTTGAGCCCTGTTGTCAAGTTATTGGGCACTGGACTCGCAAATTATGAAGGGGAGAAATGGCAAAAACATCGAAAAATTATCAACCCTGCCTTCCATGTTGAAAAATTAAAGGTAATGTCACCAACCATATTCCAATGTTGCGATGAAATGGTTAGAAAATGGGATGGGATGCTATCTTCAGATGGAAAATGTGAAATAGACATATGGCCTTTTCTTCAAAATTTGACTGGCGATATTATTTCCAAGACAGCATTTGGAAGCAGTTATGAAGAAGGAAAAAGAATATTCCATCTTTTAAGAGAACAAGCTGAACTCATTATGAAATTGCGATATGTTTTTATTCCAGGGTGGTGGTTGCTACCAACAGCTACACACAAGAGGATGACACAAATCGATAAAGATATAAAAACTTCACTCAAGTTTATCATCAGCAAAAGAGAGAAAGCAACGAAGGCAGGGGAAGTCATGAACAGAGACTTATTAGGCTTACTTTTGGAATCAAATCATAGAGAGATACAAGAACATGGAAACAACAAAGCTGCTGGAATGACAAGCCAAGAAGTAATTGAGCAGTGCAATGCATTCTACCTTGCTGGCCAAGAAACCACCTCAGATCTTCTAGTTTGGACAATGGTACTGCTTAGTAGGTATCCTAATTGGCAAGCACGTGCTAGAGACGAAGTTCTGCAAGTTTTCGGCGATCGAAAGCCAGACAAGGAAGGGTTGAGTCACCTCAAAATTATGACAATGATTTTATATGAAGTTCTAAGGTTATACCCTCCAACTATTTACTTCAATCGTGCTGTTCACAAAGATGTGAAACTTGGCAACCTTTCTCTTCCATCAGGAGTACAAGTTTCGTTGCCGATACTCTTGATTCATCACGATCGCGATATTTGGGGCGATGATGCAACAGAGTTCAAGCCGGAAAGATTCTCGGAAGGAGTTGCAAAGGCAACAAAAGGGCAAGTTTCATTCTTTCCATTTGGATGGGGTCCTAGGATATGCATTGGCCAAAATTTTGCTTTAATGGAAGCAAAGATAGTTTTGTCATTGCTTTTACAACGTTTCTCATTTGAGCTCTCCCCATCCTATACACATGCTCCAACTACTGTACTTTCTCTGAATCCAAAGCATGGAGCTCATGTTATCATACATAAATTGTAG 1569 0.399 MIKVSSPTAIWWIIVVPLVLLCAWKLLNWVWLRPKRLEKLLRAQGLEGNKYRVLVGDSMEMFKMIKEGAKSQQHNTLSNDKDVAPHVFSFIHHTVNKFGKNSFVWEGATPKVIITNPDQIKEVFNKINDFKKPKLSPVVKLLGTGLANYEGEKWQKHRKIINPAFHVEKLKVMSPTIFQCCDEMVRKWDGMLSSDGKCEIDIWPFLQNLTGDIISKTAFGSSYEEGKRIFHLLREQAELIMKLRYVFIPGWWLLPTATHKRMTQIDKDIKTSLKFIISKREKATKAGEVMNRDLLGLLLESNHREIQEHGNNKAAGMTSQEVIEQCNAFYLAGQETTSDLLVWTMVLLSRYPNWQARARDEVLQVFGDRKPDKEGLSHLKIMTMILYEVLRLYPPTIYFNRAVHKDVKLGNLSLPSGVQVSLPILLIHHDRDIWGDDATEFKPERFSEGVAKATKGQVSFFPFGWGPRICIGQNFALMEAKIVLSLLLQRFSFELSPSYTHAPTTVLSLNPKHGAHVIIHKL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30209g00030 522 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00030 522 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00030 522 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00030 522 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00030 522 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00030 522 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00030 522 FunFam Cytochrome P450 734A1 31 522 - -
Stsc30209g00030 522 SUPERFAMILY Cytochrome P450 85 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00030 522 CDD CYP72 88 518 - -
Stsc30209g00030 522 Gene3D Cytochrome P450 34 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00030 522 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00030 522 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00030 522 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00030 522 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30209g00030 522 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 515 - -
Stsc30209g00030 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Stsc30209g00030 522 Pfam Cytochrome P450 86 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30209g00030 Stsc-Chr30209 235702 239042 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30209g00030 2 522 Cytochrome P450 AT3G14690 53.537 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30209g00030 - K17873 gmx:102667924 815.839