Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30209g00018 ATGACTGCACAAGACAAACCCGGTACCGTCACTTCCCATCACCACCAATCACCACCACCACCACCACCACCCTCCAACGCCGCCGTCGTCACATCCCACCACCACCACTCTTCACATCCCACAGCTCCACCTCAGCCCTACCCTCCTGCTCAGTACGGCACCTTCCAAGGCGTCTCCAACTACCCTCCCCCTCCTAGGGATCCTCACCCAGCCATCGGCTTCCCCCACCCTGTTCCGCCACCTGGTGCCGCCGACCACTCCGCTCCTCATCCGCCCTATTACCCTCATGGCTACCAAGCAGTTCCCGGCTATGCAGTTGCTGAAGGAAGACCAGTACGAGAGCCCCGCCTTGGTTGCTGCGGTATTGGTTGTGGCTGGTGCCTGTTTATATTAGGCTTCTTGCTTGCTGGTATTCCGTGGTATGTTGGAGCAATAATTATGCTCTGCTCCAGAGTAGACCATCGGGAGAAACCCGGATATGTTGCGTGTATAATTGCTGCTGTTCTGGCAACAATTGCCGTTATTCTTGGCGTGACAAAGGGAGCCGAAGACTGGGACTGGTAA 564 0.5656 MTAQDKPGTVTSHHHQSPPPPPPPSNAAVVTSHHHHSSHPTAPPQPYPPAQYGTFQGVSNYPPPPRDPHPAIGFPHPVPPPGAADHSAPHPPYYPHGYQAVPGYAVAEGRPVREPRLGCCGIGCGWCLFILGFLLAGIPWYVGAIIMLCSRVDHREKPGYVACIIAAVLATIAVILGVTKGAEDWDW 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30209g00018 187 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 31 185 IPR044804 -
Stsc30209g00018 187 MobiDBLite consensus disorder prediction 1 89 - -
Stsc30209g00018 187 MobiDBLite consensus disorder prediction 61 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30209g00018 Stsc-Chr30209 143209 146102 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30209g00018 52 185 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 34.225 1.42e-26 98.6