Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30209g00004 ATGTCAACAGACTCAAAACCAGTGTTGAGAAGCTGCAAGCAAATGGATGACACCAACATATCTGTTGAAGAAGCCAAACAAATTGGTGAAACTAATGTTTTACCTTCAGTCCAGAAATGGATTGAGGAAGCTGAAGGAACTATTGCTGATGCAACTACTGTCATACAAGGAGAAGGTAGATGCTTCAAGTGGCCATTTCCAAACCTGTGTAAAAGGTACAAGTTGAGCAGGAAAGCCAAAAAGTTGGAAGGAGATGTTTCCAATGCGGTGTCAGAGGCAAAATTTGAGAAATTTTGTTACCGTCCACGTCCTGAAATGTCTCTCCCTCCATCTGCTAGAGACTATGAAGCTATGTGGTCAAGAACGTCAATGCTGGATGCAGTTAAGGAGGCATTAAAGAATCCTGACATTTGTATGGTTGGGGTGTATGGCATGGGCGGAGTGGGTAAGACAACGCTGGCGAAAGAGTTAGCTTGGCAAGCAGAGAAGGAAGGTTTATTTGCCACTGTGGTTATGGCTACTATAACCAGTGCTCCAAACATGAGAGGCATCCAAGGCCAACTTGCTGACGGATTGGGTCTAAAGCTAGCTTCTGAGAGTGAAGAAGGCAGAGCAGCAGAGTTACGTAAAAGGATACTAACAGAGAAGAGTATTCTTGTTATTCTTGATGATCTTTGGAGTGAGCTTGATTTGACACAGGTGGGGGTTCCTTATGGTGATCAACACAAAGGATGCAAGTTGGTGCTCACTGGTAGAGATCGTAATGTGCTGCATAGGATGGGTACCCAAACTGATTTTCCACTTGGAGTTTTGTCTCAAGGAGAAAGCTGGAGTTTGTTTGAGTCTATGGCAGGTGATGTTGTTAGGCATAGCAGGGTAGAGGCTATTGCAGTTAAGGTACTCAAATGCTGCTCTGGTTTGCCCCTTTTGATTGTTACTGTGGCAAAAGCTTTGAGGAAAAAGGAAGATGTTCGTATTTGGAAGAATGCCTTGACAAGATTAGAGGTATTCAATTCTGAAGATTTTCACAAAACCGTCTTCGAAAGGTTGAAGTTTAGTTATGAATGTTTAGAAAGTGAGGAGCTGAGATCACTATTCTTGCTCATTGGTTCCTTTGAAAATGGTTTCAACAATGATGATGGTAGTTTGAATGCCGAAGATCTGGTTCTAAGTTGTTGGGCACTGGGCTTATATAAAAATGTGAGGTCATTGGAAGAGGCAAGAAACAGGCATTATACATTGGTAAAAGAGCTTATGGACTCTTCATTGTTGCTTGACAGTGAAATAAATAGTGTAAGAATGCATGATCTTGTTCGCGATATGGCTAAATCAATTGCTTCTACCACTTGTCCTACTTATGTTGTGGAGACGTTCACTGATACAAATGAATGGCCTAACAAGGATCAACTTCAAAAGATTCATCACATTATTTTGCCAGAATATCGTATCAAGGAGCTTCCGGAAAACATGGAGTGCCCAAACTTGAAACTATTTTTTCTTCAATTCTGTTGGTTTCCCAACCTGAGTGTCCGAGATAACTTCTTCTCAAGGATGCCAGAACTAAAGGTGCTTCATTTGAATATTGGATATCCTAACTTCATGGACTTGCTGTTCCTTCATCTCTTGGGCAATTGGAAAACCTTCGATCGTTAG 1653 0.4156 MSTDSKPVLRSCKQMDDTNISVEEAKQIGETNVLPSVQKWIEEAEGTIADATTVIQGEGRCFKWPFPNLCKRYKLSRKAKKLEGDVSNAVSEAKFEKFCYRPRPEMSLPPSARDYEAMWSRTSMLDAVKEALKNPDICMVGVYGMGGVGKTTLAKELAWQAEKEGLFATVVMATITSAPNMRGIQGQLADGLGLKLASESEEGRAAELRKRILTEKSILVILDDLWSELDLTQVGVPYGDQHKGCKLVLTGRDRNVLHRMGTQTDFPLGVLSQGESWSLFESMAGDVVRHSRVEAIAVKVLKCCSGLPLLIVTVAKALRKKEDVRIWKNALTRLEVFNSEDFHKTVFERLKFSYECLESEELRSLFLLIGSFENGFNNDDGSLNAEDLVLSCWALGLYKNVRSLEEARNRHYTLVKELMDSSLLLDSEINSVRMHDLVRDMAKSIASTTCPTYVVETFTDTNEWPNKDQLQKIHHIILPEYRIKELPENMECPNLKLFFLQFCWFPNLSVRDNFFSRMPELKVLHLNIGYPNFMDLLFLHLLGNWKTFDR 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30209g00004 550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 369 IPR027417 -
Stsc30209g00004 550 Gene3D - 105 266 IPR027417 -
Stsc30209g00004 550 SUPERFAMILY L domain-like 433 528 - -
Stsc30209g00004 550 SMART AAA_5 136 270 IPR003593 GO:0016887
Stsc30209g00004 550 PRINTS Disease resistance protein signature 139 154 - -
Stsc30209g00004 550 PRINTS Disease resistance protein signature 212 226 - -
Stsc30209g00004 550 PRINTS Disease resistance protein signature 304 318 - -
Stsc30209g00004 550 Gene3D - 270 358 IPR042197 -
Stsc30209g00004 550 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 14 531 - -
Stsc30209g00004 550 FunFam Probable disease resistance protein At1g61300 110 265 - -
Stsc30209g00004 550 Pfam NB-ARC domain 122 355 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30209g00004 Stsc-Chr30209 39944 41596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30209g00004 122 445 WRKY Transcription Factor Family AT5G45050 26.380 4.82e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30209g00004 - - adu:107458573 710.679