Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2g00068 ATGGGATTGTGTTCATGGACTCCATTTCTAGCTCTGGTGCTTGTGCAGTGCCTTGATGTTGGCTTAACCACACTCAGCAAAGCAGCCATGTCCAGAGGGATGAACCACTTCGTTTTTGTTGTCTACTCAAATGCTCTTGCCACTCTCATCCTCCTCCCTTCTTCTTTCTTCATCAACAGAGCTACAACACCACCTCTTTCTTTCTCGCTTCTTTGCAAATTCTTCTTCCTTGCCCTTGTTGGCATAACTGTGATGCAGAATTGTGTTTTCACTGGCATAAGCTACACCTCTCCCACTCTTGGATCTGCTATGAGCAACTTGACTCCAGCAATTACTTTTCTGCTGGCTGTCATCTTCAGGATGGAGAAGTTGGAAATTAGGAGCTCAATAAGCCAGATCAAGATGCTAGGAGCAGGGGTGTCCATATCAGGAGCATTACTAGTCACCCTTTACAAGGGAAGTCCCATTGCTGGCCTTCAAATAATTCAACCATTACAACAAATGTTTTCAGAGACTACCAACTGGGTCATTGGTGCCCTCTTCCTTGCCACTGCATGTACTTCTCTAGCAATCTGGAGCATTGCTCAGGCAGCAATTCTCAAAGGATACCCATCGCAGTTGACCATAGTAGCCTTCTACTGCCTGTTTGGAACCATCCAATCTGCAATACTTTCCTTGATAGTAGTCAGAGATCCAAATGCCTGGAAACTAAGGCCTGACATTGAACTTATCTCCATATTCTATTCAGCAATTTTTGGAAGTGTGGTCACTTTTTCTGTAATGACCTGGTGCATAAATAAGAAAGGGCCAGTATTTGTGACCATGTTCAAGCCTCTGGGGATTGCAATTGCTGCATTCTCAAGTGTTGTCTTCCTTGGTGAAACACTTCATGTTGGCAGCATTATTGGTTCACTGGTAATCATCATCGGATTTTACACAGTACTTTGGGCACAATCCAAAGAAGAAACTGGAGAAGGCATTGATGTAAATAGACAATCATCCCTGTCTGCACATCCGAGACCTCTACTAGAGTCATCATGA 1041 0.44 MGLCSWTPFLALVLVQCLDVGLTTLSKAAMSRGMNHFVFVVYSNALATLILLPSSFFINRATTPPLSFSLLCKFFFLALVGITVMQNCVFTGISYTSPTLGSAMSNLTPAITFLLAVIFRMEKLEIRSSISQIKMLGAGVSISGALLVTLYKGSPIAGLQIIQPLQQMFSETTNWVIGALFLATACTSLAIWSIAQAAILKGYPSQLTIVAFYCLFGTIQSAILSLIVVRDPNAWKLRPDIELISIFYSAIFGSVVTFSVMTWCINKKGPVFVTMFKPLGIAIAAFSSVVFLGETLHVGSIIGSLVIIIGFYTVLWAQSKEETGEGIDVNRQSSLSAHPRPLLESS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2g00068 346 PANTHER WAT1-RELATED PROTEIN 8 328 IPR030184 GO:0016020|GO:0022857
Stsc2g00068 346 Pfam EamA-like transporter family 15 149 IPR000620 GO:0016020
Stsc2g00068 346 Pfam EamA-like transporter family 177 315 IPR000620 GO:0016020
Stsc2g00068 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 319 - -
Stsc2g00068 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2g00068 Stsc-Chr2 399554 401479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2g00068 8 335 Nodulin-like Gene Family AT5G40240 44.510 3.81e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2g00068 - - psat:127073896 459.914