Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2g00056 ATGGTGGCAAGATCATGCATCAATTTGTTGGAGTTGGTGTCAGGGGAAGTTCTAAATTTCCCTCGAACTCGCCGAGCTCTTCGGCGAGTTATGACAGTTCCAGGGACACAGTCTGATGTAGATGGCAAACAAAGGGATGATGATGATGATGATAACTTAAATGATTTCTCATCAGAATGTCATCACAAGATAATCATAGTAGCAAATTTTCTTCCCATCAATGCTGAAAAGGACAAAGAATCTGGCAGATGGTGCTATACTTATGATGAAGGTTCAATTTTGTTGCAGTTAAAAGATTCTGTCTCTTCAGACACCGATGTTGTTTTCGTGGGATCGATGAAGGCCGACATAGATGCTAGCGAACAAGACAATGTTTCTGTTCAGTTGCTAGAGGAATTCAATTGTGTTCCTACCTTTATTCCTTCAGATCTTCATAAACAATTTTATGATGGATTCTGCAAGCAACATTTGTGGCCTATATTCCATTACATGTTGCCAATGTATCCTGAATTTTGCAATCGATTCGACCGATCACTATGGCAGGCTTATGTTTCTGCTAACAAGATCTTTGCAGATAAAGTCATGGAGGTCATTAATCCAGAACATGATTATGTATGGGTTCATGATTATCATCTTATGGTTCTTCCAACATTTCTTCGAAAGCATTATAATAAGATCAAGCTAGGATACTTCCTTCATAGTCCATTTCCTTCATCAGAAATCTATAGGACTATACCTGTTAGAGATGAAATTTTGAAAGCACTGCTCAATGCAGATTTAATTGGCTTTCATACATTTGATTATGCCGCCATTTTCTATCGTGCTGCAGCCGAATTCTCGGCTTAA 846 0.3853 MVARSCINLLELVSGEVLNFPRTRRALRRVMTVPGTQSDVDGKQRDDDDDDNLNDFSSECHHKIIIVANFLPINAEKDKESGRWCYTYDEGSILLQLKDSVSSDTDVVFVGSMKADIDASEQDNVSVQLLEEFNCVPTFIPSDLHKQFYDGFCKQHLWPIFHYMLPMYPEFCNRFDRSLWQAYVSANKIFADKVMEVINPEHDYVWVHDYHLMVLPTFLRKHYNKIKLGYFLHSPFPSSEIYRTIPVRDEILKALLNADLIGFHTFDYAAIFYRAAAEFSA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2g00056 281 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 276 - -
Stsc2g00056 281 MobiDBLite consensus disorder prediction 33 52 - -
Stsc2g00056 281 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 275 IPR001830 GO:0003824|GO:0005992
Stsc2g00056 281 FunFam Trehalose-6-phosphate synthase 8 58 279 - -
Stsc2g00056 281 Gene3D Glycogen Phosphorylase B; 51 281 - -
Stsc2g00056 281 Pfam Glycosyltransferase family 20 63 275 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2g00056 Stsc-Chr2 361974 362819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2g00056 1 272 Trehalose Biosynthesis Gene Families AT1G23870 65.074 2.80e-127 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2g00056 K16055 - qsa:O6P43_022731 413.305