Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2g00052 ATGAAAGAGGGCAGTGAGGGTTTCGTGAGGGCGGATCAGATTGATCTGAAGAGCATAGATGAGCAGCTCGAGAGGCATCTAAACAAGGTCATCACCATGGACAAGAAGAAGAACCTCGACGATGACCATCAGCACCACCACCTTCTTCCTCAGCTTCACACAACCACCAGCGCTTCTGCTTCACCCAAATTCAACAAGTCCCCTGTTAGCACTCCCTTCAAGAATAAGCACACCCACGATTGGGAGATTGACCCTTCCAAACTCATCATCAAGTCCGTTATTGCTCGTGGCACTTTCGGCACTGTTCATCGTGCTCTCTATGATTCTCTAGATGTTGCTGTTAAATTGCTGGATTGGGGCGAAGAAGGGCAACGGACGGAAGCTGAAGTTAATTCTTTGAGGTCAGCCTTTATACAGGAAGTTGCTGTTTGGCACAAACTTGACCATCCCAATGTCACAAAGTTTATAGGCGCAACTATGGGGTCTTCAGAACTACAGATACAAACCGAGACTGGTGTAATTAGCATGCCAAGCAATATCTGTTGTGTTGTTGTTGAGTATCTTCCAGGAGGCACACTTAAATCTTACTTAATAAAGAACAGGAGGAGGAAACTAGCTTTTAAGGTTGTCATCCAGCTGGCACTTGATCTTGCAAGAGGGCTGAGTTACCTTCACTCACAGAAGATTGTCCATAGAGATGTAAAGACAGAAAACATGCTGTTGGATAAGACCCGTACAGTTAAAATTGCCGATTTTGGGGTTGCACGAGTGGAGGCATCAAATCCTAATGATATGACTGGGGAGACTGGCACTCTTGGTTACATGGCCCCAGAGGTTTTAAATGGCAACCCCTATAACCGGAAATGTGATGTGTACAGTTTTGGAATCTGCTTGTGGGAGATTTATTGTTGTGACATGCCATACCCTGACCTAAGTTTTTCAGAAATTACTTCGGCCGTCGTTCGCCAGAATCTGAGACCAGAAATACCAAGATGTTGCCCAAACTCTCTAGCAAATGTGATGAAGAAATGCTGGGATGCAAGTCCTGATAAGCGGCCAGAGATGGACGAGGTGGTCTCGATGTTGGAGGCCATTGACACATCCAAAGGCGGAGGCATGATCCCCGTTGATCAGCAACAGGGTTGTCTTTGCTTCCGCAAGTACAGAGGTCCTTGA 1176 0.4634 MKEGSEGFVRADQIDLKSIDEQLERHLNKVITMDKKKNLDDDHQHHHLLPQLHTTTSASASPKFNKSPVSTPFKNKHTHDWEIDPSKLIIKSVIARGTFGTVHRALYDSLDVAVKLLDWGEEGQRTEAEVNSLRSAFIQEVAVWHKLDHPNVTKFIGATMGSSELQIQTETGVISMPSNICCVVVEYLPGGTLKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEIPRCCPNSLANVMKKCWDASPDKRPEMDEVVSMLEAIDTSKGGGMIPVDQQQGCLCFRKYRGP 391
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc2g00052 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Stsc2g00052 391 FunFam Kinase suppressor of Ras 1 77 172 - -
Stsc2g00052 391 SUPERFAMILY Protein kinase-like (PK-like) 64 362 IPR011009 -
Stsc2g00052 391 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 66 365 - -
Stsc2g00052 391 Gene3D Phosphorylase Kinase; domain 1 76 172 - -
Stsc2g00052 391 MobiDBLite consensus disorder prediction 53 72 - -
Stsc2g00052 391 Pfam Protein tyrosine and serine/threonine kinase 90 362 IPR001245 GO:0004672|GO:0006468
Stsc2g00052 391 SMART serkin_6 88 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc2g00052 391 PRINTS Tyrosine kinase catalytic domain signature 223 241 IPR001245 GO:0004672|GO:0006468
Stsc2g00052 391 PRINTS Tyrosine kinase catalytic domain signature 185 198 IPR001245 GO:0004672|GO:0006468
Stsc2g00052 391 PRINTS Tyrosine kinase catalytic domain signature 289 311 IPR001245 GO:0004672|GO:0006468
Stsc2g00052 391 PRINTS Tyrosine kinase catalytic domain signature 333 355 IPR001245 GO:0004672|GO:0006468
Stsc2g00052 391 Gene3D Transferase(Phosphotransferase) domain 1 188 380 - -
Stsc2g00052 391 CDD STKc_MAP3K-like 94 362 - -
Stsc2g00052 391 ProSiteProfiles Protein kinase domain profile. 88 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc2g00052 391 FunFam Serine/threonine-protein kinase HT1 188 373 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc2g00052 Stsc-Chr2 335416 339105 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2g00052 1 323 MAP Kinase Kinase Kinase AT5G50000 76.524 0.0 524
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc2g00052 PK_Tyr_Ser-Thr 1.5e-63 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2g00052 - - gmx:100807921 671.774