Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2g00033 ATGGAAGAAACATTTGTTCCCTTTCGCGGAATCAAGAATGACCTCAAAGGAAGAATTCTATGCTATAAGCAAGACTGGACCAGTGGATTCAAGGCAGGAGTCAGGATCCTTGCTCCAACTACATATATATTTTTTGCATCAGCTATTCCTGTTATCTCTTTTGGGGAGCAACTAGAGAGAAATACTGATGGAACTCTAACTGCAGTGCAGACCCTTGCTTCGACCGCGCTATGTGGCATCATCCATGCAATCCTTGGAGGGCAACCTCTCCTCATACTGGGTGTAGCTGAGCCAACTGTTCTGATGTATACGTTCCTGTATGATTTTGCAAAGGATAGAAAAGATTTGGGGCAAAGGCTGTTCCTAGCTTGGGCTGGATGGGTGTGTGTTTGGACTGCCTTATTGCTATTTTTGTTGGCCATCCTTGGTGCATGCTCTATTATTAACAGATTCACACGCCTTGCTGGTGAACTATTTGGTCTGCTGATCGCGATGCTCTTCATGCAGCAGGCCATAAGGGGGCTAGTGGAGGAGTTTGGTGTACCACACCAAAGGGAAGATATCAATCAGACTGCACACCAATCCTCTTGGCTGTTTGGGAATGGAATGTTCGCCTTGGTTTTGTCTTTTGGCCTTCTGTTTACTGCGTTAAGAAGCCGTAAAGCTAGATCATGGCGTTATGGGACAGGTTGTTTGCGGGGATTTATAGCTGATTATGGAGTTCCTCTTATGGTACTTGTGTGGACTGCTGTGTCTTACATACCGGCCAATAACGTTCCAAGGGGAATCCCAAGGCGGCTTTTCAGTCCAAATCCATGTGTTGCATCCCAACTTGCTCAGCAGAAGGAATTCAATCTAAGAAGACCCTCTTCTTATCATTATGATCTTCTTCTGTTAGGCTTCTTAACCATATTGTGTGGACTTCTTGGAATCCCTCCTTCCAATGGTGTTATTCCTCAATCTCCAATGCATACGAAAAGCTTAGCCACTCTAAAGCATCAGCTTTTGCGGAACAAGCTTGTATCTAGCGCACGAAAAAGTATTCAGAAAAATCTGAACCTGAGTCAGTTATACCGAAATATGCAAGAATCATATGATCAAATGCAGACTCCATTAGCCCACCAAATACCACCTGCACTGGGGCTAAAAGAGTTGAAGGAATCCACAATTCAACTAGCCTCAAGTCATGGATATATTGATGCCCCTGTAGATGAGGTTGTTTTTGATGTGGACAAAGATGTTGATGACCTTTTGCCAGTTCAAGTTAAAGAACAGCGACTAAGCAATCTGCTACAAGCATTGCTGGTTGCAGCATGTGTTGCAGCCATGCCTCTTTTGAAGAAGATACCAACCTCTGTGCTATGGGGTTACTTTGCTTTCATGGCAATTGAAAGCTTGCCTGGAAATCAGTTTTGGGAGAGAATATTGTACCTGTTCACTGCTCCAAGCCGAAGATATAAAGTTCTGGAGGAACAGCATGCTGCCTGTATTGAGATTGTGCCATTCAAAACTGTTGTCACATTTACCTTGTTCCAGACAGCCTACTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCTGGGGTTCTTTTCCCACTGTTGATCATGCTTCTCATCCCTGTAAGGCAATACTTCCTTCCTAAGTTTTTCAAAGGAGCTCATCTGCAAGATTTGGATGCTGCTGCTTACGAGGATGCGCCTGCTATCCCTTTCAACTTCTTGTTCGAAGATTCAAATAGTGAGGCAAGAAATTTCAACACTAATGGTGGGGAAATTCTTGATGGAATTATCACAAGAAGTCGTGGGGAAATTCGCATCACACAAAGCCCCAAAACATTAAGTTCAACTCCAACAACTTGCAGTGATATTATACCTGCTAATGGAAATACCTCAAGTAACTGA 1905 0.4367 MEETFVPFRGIKNDLKGRILCYKQDWTSGFKAGVRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHAILGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGQRLFLAWAGWVCVWTALLLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPHQREDINQTAHQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGTGCLRGFIADYGVPLMVLVWTAVSYIPANNVPRGIPRRLFSPNPCVASQLAQQKEFNLRRPSSYHYDLLLLGFLTILCGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSSARKSIQKNLNLSQLYRNMQESYDQMQTPLAHQIPPALGLKELKESTIQLASSHGYIDAPVDEVVFDVDKDVDDLLPVQVKEQRLSNLLQALLVAACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEEQHAACIEIVPFKTVVTFTLFQTAYLLLCFGLTWIPIAGVLFPLLIMLLIPVRQYFLPKFFKGAHLQDLDAAAYEDAPAIPFNFLFEDSNSEARNFNTNGGEILDGIITRSRGEIRITQSPKTLSSTPTTCSDIIPANGNTSSN 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2g00033 634 Gene3D Helical hairpin bin 18 60 - -
Stsc2g00033 634 FunFam probable boron transporter 2 18 60 - -
Stsc2g00033 634 PANTHER ANION EXCHANGE PROTEIN 2 272 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc2g00033 634 Pfam HCO3- transporter family 420 510 IPR011531 GO:0006820|GO:0016020
Stsc2g00033 634 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Stsc2g00033 634 Pfam HCO3- transporter family 274 333 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2g00033 Stsc-Chr2 187806 191211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2g00033 1 619 Antiporters AT3G62270 71.515 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2g00033 K24194 - gmx:100815420 1048.88