Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2g00028 ATGCAGAGCGCGGCTTTCACTCTCTCCCTCTCCCCTTTCCGCAAACCCTTCCTCCACCATCTTCCTCTCTCTTCTTCTTCCTCCATTTCCACTTTCACTTCCAAACCCAACCTCATCAATGTGGATTCTCCACCCTCTTCATTTTCACCATCATACCCTCTTTCTTCTTCTTCTTCATTATTTTCTTTCAAACTACCCTCCGATCATGGCTTCGTCCCCAAGGCTGCAGCGGAGAGTAGTGCCAGCGAAAACCGCAGCGCCGGCGGTGGTGATGTTTTGGTCAGAGCTTTGGAGCTAGGAGCCTTGTTTGCTCTTTGGATCATCTTCAATATATACTTCAACATCTACAACAAACAGGTATTGAAGGTGTACCATTTTCCTTTAACTGTCACCGCGGTTCAATTTGCTGTTGGAGCTGCCCTTGTGTCCTTTATGTGGTGTTTCAATCTTTACAAGAGGCCAAAACTCAGTGCTGCTCAGCTTGCAGCAATATTGCCACTGGCTGTGGTACATACTTTGGGGAATCTTTTCACTAATATGAGTCTTGGCAAGGTTGCTGTGTCTTTCACACATACAATAAAGGCAATGGAGCCTTTCTTTTCTGTCATTCTTTCTGCTATGTTCCTTGGAGAGATGCCTAATGCATTGGTGATTGGCTCCCTTGTGCCTATTGTTGGTGGGGTGGCACTGGCTTCTGCTACTGAGGCTTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCGAATTTGTCAAATCAATCTCGTAATGTTCTTAGCAAAAAGCTCATGGTTAAGGAAGAGGAATCAATGGACAACATTACCCTCTTCTCAATAATAACAGTTATGTCCTTCCTATTGACAGCACCTGTGACTCTCATCATGGAGGGTTTCCTATTTACCCCTTCTTATCTGCAATCTGCTGGATTAAATGTTAAACAAGTTTACATCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATACCAGCAGGTTGCTTATATGATATTGCAGAGGGTGTCACCTGTTACTCACTCGGTGGCAAATTGTGTTAAGAGAGTTGTGGTTATTGTGAGCTCTGTCTTGTTCTTCCGTACACCTGTCTCACTTGTGAATGCAATTGGCACTGCTATAGCTCTTGCTGGTGTTTTCTTCTACTCCAGGGTCACCAGAATTAAACCAAAGACTACTTAG 1194 0.4447 MQSAAFTLSLSPFRKPFLHHLPLSSSSSISTFTSKPNLINVDSPPSSFSPSYPLSSSSSLFSFKLPSDHGFVPKAAAESSASENRSAGGGDVLVRALELGALFALWIIFNIYFNIYNKQVLKVYHFPLTVTAVQFAVGAALVSFMWCFNLYKRPKLSAAQLAAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEMPNALVIGSLVPIVGGVALASATEASFNWAGFWSAMASNLSNQSRNVLSKKLMVKEEESMDNITLFSIITVMSFLLTAPVTLIMEGFLFTPSYLQSAGLNVKQVYIRSLLAALCFHAYQQVAYMILQRVSPVTHSVANCVKRVVVIVSSVLFFRTPVSLVNAIGTAIALAGVFFYSRVTRIKPKTT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2g00028 397 PANTHER SOLUTE CARRIER FAMILY 35 98 390 - -
Stsc2g00028 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 139 232 - -
Stsc2g00028 397 Pfam Triose-phosphate Transporter family 98 387 IPR004853 -
Stsc2g00028 397 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 97 395 IPR004696 GO:0016020|GO:0022857|GO:0055085
Stsc2g00028 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 307 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2g00028 Stsc-Chr2 164162 166941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2g00028 1 395 Antiporters AT5G33320 66.093 7.33e-173 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2g00028 K15283 - gmx:100780925 516.924