Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc2g00018 | ATGCAAGATTTGAAACCTTTGATCACATACGCGTTCTTGATTATGTGCTCACTCTTATTATCCCCAAAGCTGGCTGCTGCTTCTTCCTCCGATAATTTTAACATTTTAGATGAAGTCTTTATCCAGTGTGGGACCACCGAATACCCGGACTTGGACCCCACCAAGATTGCCCGTATTTTCATGGTTCTCATGGACATGATTTCAACCGAAATTGAAAAACAAGGCTGGAGCACGGAATCCTTGATCAACCCACTCACCCAAATTTTCGCACTAGGGGAATGTCGCAGCGACCTCAACAGTAGCATATGCTTGAAATGCTTCCACAACGCTAGGGAACATTTGTCGCAATGCTTGCCAAAGGTAGCAGGGCGAGTGTTCATGGACGGTTGCTTTCTCCGTTACGACAACTATAGTTTCTTCAATGAAGCATTAGATAAGAAGTATGACAGTAGTGTTTGCATAAAGTCTCCTTTGAAGGAGAAGATGGAGAGCGATAGCAACGCAACGATCCAATATGGGTTCCAAGAAAAGGTTGGGAGGGCGGTATTGAACGTGACGGAGACGGCGTCGGGCGGGGCGGTTCACAAATTCGCGGTGAACGAGGACAGTAAGGACGTGTTTGCCCTGGCGCAGTGTTGGCATACATTGGACAGAGAAGGGTGTGAGAGGTGCTTGAAAAGAGCAGGGAGGAAATTGAATGATTGCATTATTGTTAACGATGAAGGTAAGAGCATGCTTGCTGGTTGTTTCTTGAAGTATTCCACTCGCAAATTCTACGCCGAAGAATTCAATGAGAACGCCGTCAAGGAGACTGATGTAAACGCTAATAATAAGGTGATTATTGCATCTTTATCGTCGGCGTTTGCTGTGACTTTGATGATCGTCGCATGTGTGATTATGAAAAGAAAGAAAGCACTATCTTGTACAGCAGGAACGGATGATAGCACCAAGATGTTTGAATACGTGGCTGGTTACACTTACAAGTATGAGATGCTTGACAAGGCAACAAATCATTTTGATCCTGCAAACAAACTAGGGGAGGGTGGAGCTGGTTCTGTGTTCAAAGGAATACTACCTCATGGGAAGATTGTTGCTGTAAAGCGACTGTTCTTTACAACACGACAGTGGACGGATGGATTCTTCAATGAGGTGAATTTGATAACAGGGATCAGGCACAAGAATCTGGTGAAACTTTTAGGGTGTAGTATTGAAGGTCCTGAAAGTCTCTTGGTTTATGAGTTTGTGTCAAATGGGAGTCTTGATCAAATACTTTTTGGTAAGGACTCAAGAATTGTTTTGACATGGAAGCAACGTTTTAATATCATATGTGGTGTAGCTGAGGCCCTGGCATACCTTCATGGAGGTGCTCAATCTAAGATTATTCACAGGGACATTAAGTCCGCGAACATCTTGCTTGATCAGAATCTTAATCCGAAAGTTGCTGATTTTGGTCTGGCTCGTTTTGTTACCGAAAATAGAAGTCATGTTACCACGGGAGTCGCCGGAACATTGTAA | 1515 | 0.4389 | MQDLKPLITYAFLIMCSLLLSPKLAAASSSDNFNILDEVFIQCGTTEYPDLDPTKIARIFMVLMDMISTEIEKQGWSTESLINPLTQIFALGECRSDLNSSICLKCFHNAREHLSQCLPKVAGRVFMDGCFLRYDNYSFFNEALDKKYDSSVCIKSPLKEKMESDSNATIQYGFQEKVGRAVLNVTETASGGAVHKFAVNEDSKDVFALAQCWHTLDREGCERCLKRAGRKLNDCIIVNDEGKSMLAGCFLKYSTRKFYAEEFNENAVKETDVNANNKVIIASLSSAFAVTLMIVACVIMKRKKALSCTAGTDDSTKMFEYVAGYTYKYEMLDKATNHFDPANKLGEGGAGSVFKGILPHGKIVAVKRLFFTTRQWTDGFFNEVNLITGIRHKNLVKLLGCSIEGPESLLVYEFVSNGSLDQILFGKDSRIVLTWKQRFNIICGVAEALAYLHGGAQSKIIHRDIKSANILLDQNLNPKVADFGLARFVTENRSHVTTGVAGTL | 504 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc2g00018 | 504 | Gene3D | Transferase(Phosphotransferase) domain 1 | 415 | 504 | - | - | |
Stsc2g00018 | 504 | ProSiteProfiles | Gnk2-homologous domain profile. | 36 | 139 | IPR002902 | - | |
Stsc2g00018 | 504 | Gene3D | - | 37 | 139 | IPR038408 | - | |
Stsc2g00018 | 504 | Gene3D | - | 157 | 258 | IPR038408 | - | |
Stsc2g00018 | 504 | ProSiteProfiles | Gnk2-homologous domain profile. | 156 | 258 | IPR002902 | - | |
Stsc2g00018 | 504 | Pfam | Protein kinase domain | 342 | 498 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc2g00018 | 504 | SUPERFAMILY | Protein kinase-like (PK-like) | 317 | 503 | IPR011009 | - | |
Stsc2g00018 | 504 | Gene3D | Phosphorylase Kinase; domain 1 | 300 | 414 | - | - | |
Stsc2g00018 | 504 | SMART | serkin_6 | 339 | 501 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc2g00018 | 504 | FunFam | Os07g0541700 protein | 415 | 503 | - | - | |
Stsc2g00018 | 504 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 301 | 414 | - | - | |
Stsc2g00018 | 504 | ProSiteProfiles | Protein kinase domain profile. | 339 | 504 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc2g00018 | 504 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 90 | 504 | - | - | |
Stsc2g00018 | 504 | Pfam | Salt stress response/antifungal | 167 | 255 | IPR002902 | - | |
Stsc2g00018 | 504 | Pfam | Salt stress response/antifungal | 85 | 137 | IPR002902 | - | |
Stsc2g00018 | 504 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 460 | 472 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc2g00018 | Stsc-Chr2 | 116719 | 118779 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc2g00018 | 13 | 504 | Receptor kinase-like Gene Family | AT5G40380 | 44.356 | 4.10e-130 | 385 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Stsc2g00018 | Pkinase | 3.4e-31 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc2g00018 | - | - | ahf:112722338 | 757.288 |