Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc296157g00001 ATGACGTCACGCTCAGGGAATGGTGGCCATGCTGCCAATAGCGGAAAGACACGTGTCGGAAAGTACGATCTGGGAAGGACACTGGGCGAGGGGACTTTCGCGAAGGTGAAGTTTGCGAAGAATACGGTCACCGGAGACAATGTCGCCATCAAGATTCTCGACAAGGAGAAAATTCTCAAGCACAAGATGATCGACCAG 198 0.5202 MTSRSGNGGHAANSGKTRVGKYDLGRTLGEGTFAKVKFAKNTVTGDNVAIKILDKEKILKHKMIDQ 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc296157g00001 66 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Stsc296157g00001 66 Gene3D Phosphorylase Kinase; domain 1 10 66 - -
Stsc296157g00001 66 MobiDBLite consensus disorder prediction 1 21 - -
Stsc296157g00001 66 SUPERFAMILY Protein kinase-like (PK-like) 13 61 IPR011009 -
Stsc296157g00001 66 ProSiteProfiles Protein kinase domain profile. 22 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc296157g00001 66 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc296157g00001 Stsc-Chr296157 13 210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc296157g00001 5 66 CBL-interacting serine-threonine protein kinases AT1G01140 64.516 4.05e-23 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc296157g00001 - - thj:104812679 106.301