Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc295g00004 ATGGAGGAGACTGAAGCTTGTGCAAAAGACAGCCCTCTCGTTCTGTTGAAGCAAGGCGCTGAAGCTAGGGTTTTTGAGTCCAATTTTGTTGGGAGGAGATCTGTTATCAAAGAACGCTTCTCAAAGAAGTATAGGCATCCAACTTTGGATTCTAAGCTTACCCTTAGGCGCTTAAATGCTGAAGCTAGGTGCATGACCAAAGCAAGAAAGCTTGGGGTTTGTACTCCCGCACTCTATGCTGTGGATACTGTGTTGAACACTTTAACTTTTGAGTATGTTGAGGGTCCTTCCCTCAAAGAAGTACTTCTTGAATTTGGGTTGAAAGGTGTTGTTGAAGAGCGGCTTGATGATATTGCTTCCCAAGTTGGTGATGCGATTGGTAAATTGCATGATGGTGGCCTTATTCATGGTGACTTAACAACATCAAATATGTTGCTAAAGAGTGGTACCAATCAATTGGTCCTAATTGACTTTGGATTGAGCTTCACTTCAACTCTACCAGAAGATAAAGCTGTTGATTTGTATGTGCTGGAAAGAGCTCTTCTTTCAATGCATTCTTCATGTGGGAATGTGAATGTTCTCTTCTTGATCAAATGGAGGCAACAAACATTATTGATTTCTCACTTAGTACAATACCATAATCTCGATGGATCGGATACTTGCTGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAATAA 708 0.4138 MEETEACAKDSPLVLLKQGAEARVFESNFVGRRSVIKERFSKKYRHPTLDSKLTLRRLNAEARCMTKARKLGVCTPALYAVDTVLNTLTFEYVEGPSLKEVLLEFGLKGVVEERLDDIASQVGDAIGKLHDGGLIHGDLTTSNMLLKSGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSCGNVNVLFLIKWRQQTLLISHLVQYHNLDGSDTCCIPQVIKAVVIHIE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc295g00004 235 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 202 IPR022495 GO:0004674
Stsc295g00004 235 Pfam Protein kinase domain 48 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc295g00004 235 ProSiteProfiles Protein kinase domain profile. 10 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc295g00004 235 SMART serkin_6 10 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc295g00004 235 SUPERFAMILY Protein kinase-like (PK-like) 15 175 IPR011009 -
Stsc295g00004 235 ProSitePatterns Tyrosine protein kinases specific active-site signature. 134 146 IPR008266 GO:0004672|GO:0006468
Stsc295g00004 235 NCBIfam KEOPS complex kinase/ATPase Bud32 19 195 IPR022495 GO:0004674
Stsc295g00004 235 Gene3D Transferase(Phosphotransferase) domain 1 106 212 - -
Stsc295g00004 235 FunFam TP53-regulating kinase isoform X1 21 93 - -
Stsc295g00004 235 Gene3D Phosphorylase Kinase; domain 1 21 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc295g00004 Stsc-Chr295 33654 36891 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Os Stsc295g00004 Pkinase 2.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc295g00004 K08851 - jre:109018511 333.183