Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc295g00003 ATGGAGGAGACTGAAGCTTGTGCAAAAGACAGCCCTCTCGTTCTGTTGAAGCAAGGCGCTGAAGCTAGGGTTTTTGAGTCCAATTTTGTTGGGAGGAGATCTGTTATCAAAGAACGCTTCTCAAAGAAGTATAGGCATCCAACTTTGGATTCTAAGCTTACCCTTAGGCGCTTAAATGCTGAAGCTAGGTGCATGACCAAAGCAAGAAAGCTTGGGGTTTGTACTCCCGCACTCTATGCTGTGGATACTGTGTTGAACACTTTAACTTTTGAGTATGTTGAGGGTCCTTCCCTCAAAGAAGTACTTCTTGAATTTGGGTTGAAAGGTGTTGTTGAAGAGCGGCTTGATGATATTGCTTCCCAAGTTGGTGATGCGATTGGTAAATTGCATGATGGTGGCCTTATTCATGGTGACTTAACAACATCAAATATGTTGCTAAAGAGTGGTACCAATCAATTGGTCCTAATTGACTTTGGATTGAGCTTCACTTCAACTCTACCAGAAGATAAAGCTGTTGATTTGTATGTGCTGGAAAGAGCTCTTCTTTCAATGCATTCTTCATGTGGGAATGTGGTAATTCAGTATGCCCTTTTTCAATAA 600 0.4167 MEETEACAKDSPLVLLKQGAEARVFESNFVGRRSVIKERFSKKYRHPTLDSKLTLRRLNAEARCMTKARKLGVCTPALYAVDTVLNTLTFEYVEGPSLKEVLLEFGLKGVVEERLDDIASQVGDAIGKLHDGGLIHGDLTTSNMLLKSGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSCGNVVIQYALFQ 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc295g00003 199 NCBIfam KEOPS complex kinase/ATPase Bud32 19 190 IPR022495 GO:0004674
Stsc295g00003 199 SUPERFAMILY Protein kinase-like (PK-like) 15 175 IPR011009 -
Stsc295g00003 199 ProSitePatterns Tyrosine protein kinases specific active-site signature. 134 146 IPR008266 GO:0004672|GO:0006468
Stsc295g00003 199 Gene3D Transferase(Phosphotransferase) domain 1 106 197 - -
Stsc295g00003 199 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 192 IPR022495 GO:0004674
Stsc295g00003 199 Gene3D Phosphorylase Kinase; domain 1 21 93 - -
Stsc295g00003 199 FunFam TP53-regulating kinase isoform X1 21 93 - -
Stsc295g00003 199 ProSiteProfiles Protein kinase domain profile. 10 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc295g00003 199 Pfam Protein kinase domain 47 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc295g00003 Stsc-Chr295 31825 36891 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Os Stsc295g00003 Pkinase 1.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc295g00003 K08851 - jre:109018511 332.028