Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2921g00001 ATGACTCCGTTAATCTCCTACACCTTCTTCCTTTCTATTCTTGTCCTCTTGATAACGCTCAAGTACCTCTTTTCAACAAGAATACTCAAGAACCTTCCACCAGGTCCACCAGCTCTTCCCATCTTAGGCAACCTCCGCCAACTCAAATTCCCCATGCACCGAACCCTCCACGCATTCTCTCAAAAGTATGGCCAAGTCTTCTCCCTCTGGTTCGGCTCCCAGTTCGTCGTCGTCGTCTCGTCGCCGTCTGTTGTTCACGAATGCTTCACCAAAAACGACATCATCTTGGCCAACCGGCCGCCCCTCACAGCCGGGAAACATGTCGGCTACAACTTCACCACCGTCACCGTCGCGCCTTACGGCGACCACTGGCGCAATGTCCGCCGTATTATCTCCCTTGATGTCCTCTCCACGCACCGCCTGAACTCGTTCTTGGAAATACGGAAGGACGAGATTATGAGGCTGGTGCAAAGCCTTGCGGCTCCATCGCGGAACGGCGAAGATTTTGCGAAGGTGGAGCTGAAGTCAAAGCTCAACGAGATGACGTTCAACACCATCATGAGGATGATCTCGGGGAAGAGGTACTATGGTGGTGACTGTGACGTCAATGACACAGAGGAAGCGAGGCAGTTCAGGGAGATCATGAAGGAGCTTTTATCGTTTGGAGGGTCAAGTAACCCTTTTGAATTCGTGAAGGTTCTTCGGTGGTTCGACTTTGGGAATGTGGAAAAGAAGCTCAAGGCTATTGCTAGGAGATGCGATGCATTCTTGCAGGGGCTTCTTGATCAACACAGAATGAAACAGGGTAGTGATAATAAAAATACTATGATTGACCATTTATTGAGCTTGCAACAATCGCAACCCGAGTACTACACGGATCAAATCATCAAAGGCATTGTTCTGGTTATGCTTCTTGGAGGAACAGAAACATCGGCAACTTCTTTAGAATGGGCCATGGCTGCATTACTAAACCATCCAGAAGCGTTAAAGAAGTCCAAGGAAGAAATTGATACTCAAATAGGACAAGATCGCTTGATTGAAGAATCCGACATTTCGAAACTTCCTTACCTACAAAATATCATCCACGAAACGTTTCGATTGTACCCAGCATTCCCATTATTGGCGCCGCATTATTCTTCAAAAGATTGCACCGTTGGAGGATACAACTTCCCAAAGAATACTATTCTCTTGGTAAATGCTTGGGCTATTCATAGAGATCCTGAATTATGGAACGACCCTACAAAGTTCAAGCCTGAGAGGTTTGAGAAAGAAGGAGAAGCAGAAAAGTTGATTCCATTTGGGCTCGGAAGAAGGGCATGTCCTGGAGCAAACTTGGGAAACCGTACAGTGAGTTTAACTTTGGGATTGTTGATTCAATGTTTTGAATGGAAGCGAATGAGTGAAGAAAAAATTGATATGAGTGAAGGAAAAGGAGCCACCACCCCAAAATTGATTCCTTTGGAGGCCTTCTGTAAAGCACGCCAAAGTATCATTAACAAGGGTTTTTAA 1509 0.4619 MTPLISYTFFLSILVLLITLKYLFSTRILKNLPPGPPALPILGNLRQLKFPMHRTLHAFSQKYGQVFSLWFGSQFVVVVSSPSVVHECFTKNDIILANRPPLTAGKHVGYNFTTVTVAPYGDHWRNVRRIISLDVLSTHRLNSFLEIRKDEIMRLVQSLAAPSRNGEDFAKVELKSKLNEMTFNTIMRMISGKRYYGGDCDVNDTEEARQFREIMKELLSFGGSSNPFEFVKVLRWFDFGNVEKKLKAIARRCDAFLQGLLDQHRMKQGSDNKNTMIDHLLSLQQSQPEYYTDQIIKGIVLVMLLGGTETSATSLEWAMAALLNHPEALKKSKEEIDTQIGQDRLIEESDISKLPYLQNIIHETFRLYPAFPLLAPHYSSKDCTVGGYNFPKNTILLVNAWAIHRDPELWNDPTKFKPERFEKEGEAEKLIPFGLGRRACPGANLGNRTVSLTLGLLIQCFEWKRMSEEKIDMSEGKGATTPKLIPLEAFCKARQSIINKGF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2921g00001 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Stsc2921g00001 502 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 PANTHER CYTOCHROME P450 82C3-RELATED 16 495 - -
Stsc2921g00001 502 FunFam Cytochrome P450 family protein 24 497 - -
Stsc2921g00001 502 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 Pfam Cytochrome P450 33 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 CDD CYP81 64 487 - -
Stsc2921g00001 502 SUPERFAMILY Cytochrome P450 33 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2921g00001 502 Gene3D Cytochrome P450 26 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2921g00001 Stsc-Chr2921 1029 4086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2921g00001 8 498 Cytochrome P450 AT4G37370 55.242 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2921g00001 K13260 - gmx:100811727 708.753