Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc28g00012 ATGGCGTCTGGATCCTCAGGCCGCGGCAATTCGGGTTCCAAAGGCTTTGATTTTGGTTCCGATGATATCCTCTGCTCCTACGAAGACTTCGGTAACAGGGATTCCAATTCTTCCAATGGTAATCACTCCGATCCGGTCATCAACGCCAATTCAACTAAGGATTTTCACAAATCAAGGATGGCGAGAGCATCAATGTTCCCTACTACTGCCTACAATCCGCCTGAAGATTCTCTAAGCCAAGATGTGATTGCAACTGTGGAGAAGAGCATGAAAAAATATGCTGACAACCTCATGCGATTTCTCGAGGGAATTAGTTCAAGGTTATCCCAATTGGAATTGTATTGCTACAATCTTGACAAATCTATTGGAGAAATGAGATCTGATTTGAATCGTGACCATGGGGAGCAAGATTTAAAGCTCAAGGCACTTGAAAAACATCTTCAAGAGGTTCATAGATCCGTGCAAATTTTAAGAGACAAGCAAGAGCTAGCTGACACACAGAAAGAATTAGCCAAGCTTCAACATGCTCAGAAGGAATCATCTTCTTCGAGCCACTCAGAGGAGAGATCTTCACCTTCTACAACGGATCCTAAAAAGACTGATAGTGCATCTGATGCACACAACCAGCAGTTAGCTCTTGCACTTCCTCATCAAATTCCGCCACAGCAGCCACCACCTCAGCCAGCTGCACACACTCAAGCTCCAGTAGCAAATGCGTCCCAGGCCACCCAACAACCTACTTATTACATGCAGCAAGCCCCGGCCGCAATGCCGAACCCTCCGGCTGCTCCCCAGCTCCCTCAGAATCAGTATTTGCCACCAACAAATCAACAATACCAAACACCCCAACTTCAACAAGACATGACGCGGGTGGCTCCACAACCAACTCCATCTCAGGTAACCCCATCCCCACCTGTGCAACAGTTTCCTCAGTATCAGCAGCCACAGCCACAGCCGCAGCCGCAGCCGCAGCCGCCCCAGCAGCAATGGTCTCAGCAGGTGCCACCTACACAGCCACCCTCAATGCCACCCCAGATTAGAACCCCCTCATCGTACCCTCCCTATCAACCAAGCCAACCAGCAAATCCAACTCCCCCCACTGAAACACTACCAAACAGCATGCCCATGCAAATGCCGGCATACTCTGGAGTTCCACAACCTGGTTCTAGCCGTGCCGATGCCATGCCATATGGATACGGAGGAACTGCTGGCCGAACTGTTCCGCAGCAGCAACCTCCACCCCAGCAGATGAAGGGCTCTTTCCCGACCCAACCAAGTGACATGTACGGAACTGCCAGCCCCCATGCGGCACTTCCTCCTCCAGCCAGTGCATACATGATGTACGAAGGCGAGGGGGGGAGGACACACCATCCACCCCAACCTCCTCACTATGCTCAAGCTGGATACCCTCCATCAAGTGCTGCACTCCAGAACCCCGGCAGCCACAATATTATGGCGAGGAATCCTAACCAGACACAGTTTATGCGCAACCACCCTTACAACGAGCTGATTGAGAAAATGGTGAGCATGGGATTCAGGGGTGATCATGTGGCAAGCGTGATCCAGAGGATGGAGGACAGTGGACAGCCAATAGACTTCAACTCTGTGCTTGACAGGTTGAATGTTCATGGCTCTGTGGGCCCCCAAAGAGGAGGATGGTCAGGGTGA 1668 0.5114 MASGSSGRGNSGSKGFDFGSDDILCSYEDFGNRDSNSSNGNHSDPVINANSTKDFHKSRMARASMFPTTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLNRDHGEQDLKLKALEKHLQEVHRSVQILRDKQELADTQKELAKLQHAQKESSSSSHSEERSSPSTTDPKKTDSASDAHNQQLALALPHQIPPQQPPPQPAAHTQAPVANASQATQQPTYYMQQAPAAMPNPPAAPQLPQNQYLPPTNQQYQTPQLQQDMTRVAPQPTPSQVTPSPPVQQFPQYQQPQPQPQPQPQPPQQQWSQQVPPTQPPSMPPQIRTPSSYPPYQPSQPANPTPPTETLPNSMPMQMPAYSGVPQPGSSRADAMPYGYGGTAGRTVPQQQPPPQQMKGSFPTQPSDMYGTASPHAALPPPASAYMMYEGEGGRTHHPPQPPHYAQAGYPPSSAALQNPGSHNIMARNPNQTQFMRNHPYNELIEKMVSMGFRGDHVASVIQRMEDSGQPIDFNSVLDRLNVHGSVGPQRGGWSG 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc28g00012 555 MobiDBLite consensus disorder prediction 269 296 - -
Stsc28g00012 555 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 3 555 - -
Stsc28g00012 555 MobiDBLite consensus disorder prediction 297 372 - -
Stsc28g00012 555 MobiDBLite consensus disorder prediction 404 430 - -
Stsc28g00012 555 Pfam UBA-like domain (DUF1421) 500 544 IPR010820 -
Stsc28g00012 555 Coils Coil 140 176 - -
Stsc28g00012 555 MobiDBLite consensus disorder prediction 171 432 - -
Stsc28g00012 555 MobiDBLite consensus disorder prediction 171 203 - -
Stsc28g00012 555 MobiDBLite consensus disorder prediction 233 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc28g00012 Stsc-Chr28 96330 100809 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc28g00012 63 186 Trihelix Transcription Factor Family AT5G14540 33.871 2.57e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc28g00012 - - adu:107478128 801.971