Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc286g00003 ATGGAGTCTAATGAAGTTCGATATGTAGGAATCTGGGGGATGGGAGGCATAGGTAAAACAACAATTGCTAGAGCAATATATGCCAGATATGCCTCTCAAATCGAAGGTTGCTGTTTTCTAGAAAATGCAACAGAAAAATGGCAAAAGTCTAGTCTGCTTTGCTTATATGAGCAAGTTATTTCTGAACTACTTGAAGAAGGAGAAAATCTACTTGTGAAGGGATCAGCCAAGGCAAGATTTGACCTCTTCAACAATGGTGTTAAGGCCACATTTGTAAGTCAAACTATATACTTTGTCCATGAAAGAGCTGGAGGATGGAAGGGTGATCACGTTTTAATATGGAATAGTCCATTGGGTAGCCTGTTGAGTAACATTAACAGGTGCAGAGGCAGAGAAGGCAGTGATGATGATGATGAAGACAGAACTTGCAACCAAAAGATCTCTTTCAGATTCTGTTTTTTCAGAGCTGAGAAAGAAGGGGAAGAATGTGAGGAAGAGTGTTATATCAAAGGGTGTGGGGTAATTCCAATGTATGCCTCAAGTGTAGTGGATGCCATTCAAAAGCTTGAGTTGGAGTACAACTTGAACCCTTGTGATCATAGAACCATCCCATGGATAAATCTCGACACATTGAAACGTGCCATGACCAGGAAGAGTAGAGGAAAATTAAAACTCCAAAACCATGTGCTTTTTTATTCATTTGCACTTTTTGCTGAGTAA 720 0.3986 MESNEVRYVGIWGMGGIGKTTIARAIYARYASQIEGCCFLENATEKWQKSSLLCLYEQVISELLEEGENLLVKGSAKARFDLFNNGVKATFVSQTIYFVHERAGGWKGDHVLIWNSPLGSLLSNINRCRGREGSDDDDEDRTCNQKISFRFCFFRAEKEGEECEEECYIKGCGVIPMYASSVVDAIQKLELEYNLNPCDHRTIPWINLDTLKRAMTRKSRGKLKLQNHVLFYSFALFAE 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc286g00003 239 Gene3D - 1 87 IPR027417 -
Stsc286g00003 239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 70 IPR027417 -
Stsc286g00003 239 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 69 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc286g00003 Stsc-Chr286 17116 17990 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc286g00003 5 58 WRKY Transcription Factor Family AT5G45050 42.593 9.95e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc286g00003 - - aip:107626076 132.88