Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc284534g00001 ATGGCGACCTACGATCTCACTCCTCGGATAGCTCCGAATCTTGACAGGCACCTTGTGTTCCCTCTTCTGGAGTTCCTTCAGGAGCGCCAGCTTTACAACGATGGTGACATCCTCAAGGCCAAGATCGAGCTCCTCAATAACACTAACATGGTTGACTACGCCATGGACATCCACAAGAGCCTCTACCACACCGAAGACGTTCCTCAAG 208 0.5192 MATYDLTPRIAPNLDRHLVFPLLEFLQERQLYNDGDILKAKIELLNNTNMVDYAMDIHKSLYHTEDVPQ 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc284534g00001 69 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 69 IPR016650 GO:0003743|GO:0005737|GO:0005852
Stsc284534g00001 69 SMART eIF3_N_2 5 69 IPR019010 -
Stsc284534g00001 69 Pfam eIF3 subunit 6 N terminal domain 5 69 IPR019010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc284534g00001 Stsc-Chr284534 48 255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc284534g00001 4 69 Eukaryotic Initiation Factors Gene Family AT3G57290 84.848 1.79e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc284534g00001 K03250 - aew:130773462 134.806