Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2829g00001 ATGAGGCCGGATGTTGTTCCTTACAAAAGTGTTCTGTCCGCTTTGACGAGGATTACCCATGAGGAAGGCTTGCGAGGACTATATAGTGGCATTTTGCCTTCATTGGCTGGTGTAAGTCATGTTGCAATTCAATTCCCAGCATATGAAAAGATCAAGTCATACATGGCAAAAAAAGATAATACAACTGTTGACAAGCTTAGTCCTGGAAGTGTTGCCATTGCATCGTCAATTTCAAAAGTAATCGCCTCTGTAATGACTTATCCACACGAGGTGATACGTTCAAGGCTGCAAGAGCAAGGCCAGGCCAAAAACATGGGGGTTCAGTATGCCGGAGTTATTGATTGTACTAAGAAGGTTTTCCATAAAGAAGGTATTCCAGGCTTTTATCGCGGTTGCGCAACCAATCTGTTAAGGACAACTCCATCTGCTGTTATTACCTTCACCAGTTACGAGATGATACATCGGTTCTTGTCGCGGCTTATACGCGAGGATGAGGGTAATCCGCAGAGCCGTCCAAAATCCAAAGCACTTAACAAGTCCCAGGTAGAAGGCAGTAACATCATTCATAATGACTCTGCTGATACGAGGCCATCACCATCACAGTCTAACAAGAAAGGCTCATCAATTCCTTTGGGAAACAAAGAGCAGCTAACCCGACACTGA 663 0.4434 MRPDVVPYKSVLSALTRITHEEGLRGLYSGILPSLAGVSHVAIQFPAYEKIKSYMAKKDNTTVDKLSPGSVAIASSISKVIASVMTYPHEVIRSRLQEQGQAKNMGVQYAGVIDCTKKVFHKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLSRLIREDEGNPQSRPKSKALNKSQVEGSNIIHNDSADTRPSPSQSNKKGSSIPLGNKEQLTRH 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2829g00001 220 MobiDBLite consensus disorder prediction 171 220 - -
Stsc2829g00001 220 Gene3D Mitochondrial carrier domain 2 160 IPR023395 -
Stsc2829g00001 220 Pfam Mitochondrial carrier protein 66 158 IPR018108 -
Stsc2829g00001 220 Pfam Mitochondrial carrier protein 9 58 IPR018108 -
Stsc2829g00001 220 SUPERFAMILY Mitochondrial carrier 6 152 IPR023395 -
Stsc2829g00001 220 MobiDBLite consensus disorder prediction 164 220 - -
Stsc2829g00001 220 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 54 IPR018108 -
Stsc2829g00001 220 ProSiteProfiles Solute carrier (Solcar) repeat profile. 66 156 IPR018108 -
Stsc2829g00001 220 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 7 162 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2829g00001 Stsc-Chr2829 3882 5708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2829g00001 1 214 Chloroplast and Mitochondria Gene Families AT1G25380 62.727 1.55e-92 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2829g00001 K15115 - gmx:100816376 348.591