Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc282013g00001 ATGAAGGAGATAGGTGCCAGGATGGAGAAGTTCGCCAGGCTCATGGGAGTTCCGTTCAAGTTCAACGTCGTTCACCATTCCGGTGATCTCTCCGAGTTCGATTTCGGAGAATTGGATATCAGGGACGACGAGGCGTTAGCTGTTAACTGCGTCAACTCGTTGCACTCGATCGGTGCGGTGGGGAACCGCCGCGACGCGGTGATATCGTCGCTGAGAAGGCTTCAGCCGAGGATCGTGACGGTGGTGGAGGAAGAAGCCGATTTGGACGTTGGTTTGGAAGGATTCGAGTTCGTGAAAGGGTTCCAAGAATGCTTGAGGTGGTTTAGGGTTTACTTTGAGGCGCTGGAGGATAGTTTTCCAAGGACGAGTAACGAGAGGCTGATGCTGGAGAGGGCGGCGGGGAGGGCGATGGTGGACTTGGTGGCGTGTTCGGCTGAGGAATCGTCGGAGAGGAGGGAGACGGCGGGGAGATGGTCGCAGAGGATGCATGGATCGGGGTTCAATGCGGCGTCGTTTAGCGAGGAAGTTAGCGATGATGT 539 0.5603 MKEIGARMEKFARLMGVPFKFNVVHHSGDLSEFDFGELDIRDDEALAVNCVNSLHSIGAVGNRRDAVISSLRRLQPRIVTVVEEEADLDVGLEGFEFVKGFQECLRWFRVYFEALEDSFPRTSNERLMLERAAGRAMVDLVACSAEESSERRETAGRWSQRMHGSGFNAASFSEEVSDDV 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc282013g00001 180 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 176 IPR005202 -
Stsc282013g00001 180 Pfam GRAS domain family 1 178 IPR005202 -
Stsc282013g00001 180 ProSiteProfiles GRAS family profile. 1 180 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc282013g00001 Stsc-Chr282013 1 539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc282013g00001 1 180 GRAS Transcription Factor Family AT4G37650 71.739 4.23e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc282013g00001 GRAS 7.9e-46 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc282013g00001 - - gmx:100820459 299.671