Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc280736g00001 ATGTCCCTCGGCGCCATCATCACCACCACCAACCCCCTCAACACCGCCGCCGAAATCCGCAAGCAAATCAACGACTCCAAGCCTGTCATCGCCTTCACCACCCCTCCCTTGGCCTCCAAAATCGCCGCCGCCTCTTCCTCACTCCCGATCATCCTCATGCAGGCCGACAACAACAGCAGCTTCCCTTCAGCCCTGACAACCCTGAGCCGCATGATGGAAAAAGAAGGCAGGTCAAACCGAGTCAAAGAGCGAGTCAACCAGGATGACACGGCCACCCTGCTCTACTCGTCCGGCACGACTGGTCCCAGCAAAGGCGTGGTTTCTTCTCACCGCAACCTCATGGCTATGGTACAGATCGTGCTCGGCAGATTCAACATCGAAGAGGAGCAGACCTTCATCTGCACCGTTCCAATGTTCCACATATACGGGCTGGTGGCTTTTGCGACGGGGCTTCTTGCGGCGGGGGCCACAATCGTGGTGCTTTCCAAGTTCGAGATGCACGACATG 507 0.5759 MSLGAIITTTNPLNTAAEIRKQINDSKPVIAFTTPPLASKIAAASSSLPIILMQADNNSSFPSALTTLSRMMEKEGRSNRVKERVNQDDTATLLYSSGTTGPSKGVVSSHRNLMAMVQIVLGRFNIEEEQTFICTVPMFHIYGLVAFATGLLAAGATIVVLSKFEMHDM 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc280736g00001 169 Gene3D - 110 168 - -
Stsc280736g00001 169 Pfam AMP-binding enzyme 2 166 IPR000873 -
Stsc280736g00001 169 Gene3D - 1 109 - -
Stsc280736g00001 169 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 169 - -
Stsc280736g00001 169 SUPERFAMILY Acetyl-CoA synthetase-like 2 166 - -
Stsc280736g00001 169 ProSitePatterns Putative AMP-binding domain signature. 93 104 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc280736g00001 Stsc-Chr280736 1 679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc280736g00001 1 169 Monolignol Biosynthesis Gene Families AT1G20510 68.824 4.17e-75 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc280736g00001 K10526 - gmx:100811344 234.187