Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc280287g00001 ATGATGTCCCCAAAAGGTTTTTCTTCTCCATGTCCAAGTTCATGTAGTGAGCAATTTGAGAGGTCCTCCGAACCGGCTAAGAACAGCAAGAAAAGGGCTAGGCCTGGGGAAAGTTGTAGGCCAAGGCCAAGGGACAGACAGTTGATCCAGGATCGCATTAAGGAGTTGAGAGAATTGGTGCCGAATGGAGCTAAGTGCAGTATCGATTCACTGCTTGAGTGCACGATAAAGCACATGCTTTTCCTCCAGAGCGTAACTAAGCATGCTGACAAGCTAAACAAAGTTGCGGATGCATCAAAGACAAAGCGGCATCACACGGAAACAGATATTCTCGGTCCATCTAGTTATCAACAGGGTTCAAGTTGGGCAATGGAGGTAGGAGGCCATCTGAAAGTTCGGTCAATATTG 408 0.4706 MMSPKGFSSPCPSSCSEQFERSSEPAKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQSVTKHADKLNKVADASKTKRHHTETDILGPSSYQQGSSWAMEVGGHLKVRSIL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc280287g00001 136 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 11 135 IPR043561 GO:0003700|GO:0006355
Stsc280287g00001 136 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 33 82 IPR011598 GO:0046983
Stsc280287g00001 136 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 89 IPR036638 GO:0046983
Stsc280287g00001 136 MobiDBLite consensus disorder prediction 1 22 - -
Stsc280287g00001 136 MobiDBLite consensus disorder prediction 23 48 - -
Stsc280287g00001 136 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc280287g00001 Stsc-Chr280287 1 745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc280287g00001 2 136 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 65.926 1.96e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc280287g00001 - - adu:107473585 267.314