Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc27g00011 ATGATGTTGATGATGATGACTACCTATACCTCTGTAGTTAACGTTGTTGTTCTTGTGTTGTTGTGTCTCCAATGTGTCTCTGTGGCTTCTCTTGAGTTCCAAGTAGGTGGCCCTAAGGGCTGGGTTGTTCCTCCTTCTAATGACACCAACATCTACAATAACTGGGCTTCCCACAACAGGTTCCAACTTGGTGACACCCTCCGTTTCAGGTACAAGAAGGACTCAGTGATGGAGGTGGGTTTGGAAGATTACAAGCAATGCAACTCAACTCACCCAACCTTCTTCTCCAACATCGGCAACACCGAGTTCAAGTTCCGACACCCGGGGACATTCTACTTCATCAGCGGCGCCACGGGGCACTGCAAGAAAGGACAGAAGATGGCTATTAGGGTTATGGTTCCAGATGATCATGACCATGACAAGTCTCATGGCTACCATCTTGCAGCTTCACCGTTTGCTGGGGTTCCTGGAATAACAATGATCCTCTTATTCCTTCACTTTGTTTTGGATTATGTTGCTTTTGCTTCCTACATGTAA 537 0.4655 MMLMMMTTYTSVVNVVVLVLLCLQCVSVASLEFQVGGPKGWVVPPSNDTNIYNNWASHNRFQLGDTLRFRYKKDSVMEVGLEDYKQCNSTHPTFFSNIGNTEFKFRHPGTFYFISGATGHCKKGQKMAIRVMVPDDHDHDKSHGYHLAASPFAGVPGITMILLFLHFVLDYVAFASYM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc27g00011 178 PANTHER BLUE COPPER PROTEIN 24 138 IPR039391 GO:0009055
Stsc27g00011 178 Pfam Plastocyanin-like domain 50 125 IPR003245 GO:0009055
Stsc27g00011 178 Gene3D - 30 135 IPR008972 -
Stsc27g00011 178 CDD OsENODL1_like 32 132 IPR041846 -
Stsc27g00011 178 ProSiteProfiles Phytocyanin domain profile. 31 133 IPR003245 GO:0009055
Stsc27g00011 178 SUPERFAMILY Cupredoxins 31 132 IPR008972 -
Stsc27g00011 178 FunFam Early nodulin-like protein 1 30 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc27g00011 Stsc-Chr27 46394 47501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc27g00011 18 168 Phytocyanin Superfamily AT5G14345 47.020 1.02e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc27g00011 - - lang:109346935 204.142