Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc277481g00001 ATGTGCTTATTGGCTCTATGCCATACTGCAATATCTGAAGTTGATGAGAAAACTGTCAAAGTTTCGTATGAAGCCGAGTCACCGGATGAGGCAGCTTTTTTCATAGCTGCTAGAGAACCTGGATTTGAGTTTTATGAAAGGACACAATTAACTATTTTGCTGCGCGAGCTCAATTCTGCATCAGGCAAGATTACTGAAAGGACCTATAAACTTTTGAATATATTACAATTTACTATTGCAAGAAAGAGGATGTCGGTAATAGTGAGAGATGAGGAGGGTAAGCTACTACTACTTAGCAAAGGCGCTGACAGTGTCATGTTTGAATGGCTCGCAAAGGATGGAAGGGAGTTTGAATAG 357 0.4034 MCLLALCHTAISEVDEKTVKVSYEAESPDEAAFFIAAREPGFEFYERTQLTILLRELNSASGKITERTYKLLNILQFTIARKRMSVIVRDEEGKLLLLSKGADSVMFEWLAKDGREFE 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc277481g00001 118 Gene3D - 1 116 IPR023299 GO:0000166
Stsc277481g00001 118 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 3 110 - -
Stsc277481g00001 118 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 4 108 IPR023299 GO:0000166
Stsc277481g00001 118 Pfam Cation transport ATPase (P-type) 6 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc277481g00001 Stsc-Chr277481 779 1539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc277481g00001 3 118 Primary Pumps ATPases AT1G13210 73.276 3.64e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc277481g00001 K01530 - gmx:100799312 177.563