Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc2773g00001 | ATGGGAAGGTGTCTACGCTGCTGCGGAGATGAAAGTAGTGGTGGTGTCAAGAAAGGTCCATGGACTCCTGAAGAAGATCAAAAGCTTCTTCACCACATTCACAAACATGGCCATAGAAATTGGAGGCTTCTCCCTAAGCTAGCCGGTCTTAATAGATGTGGTAAGAGCTGCAGGCTTAGATGGATCAACTATTTGAGGCCTGGTATCAAGAGGGAAAAGTTCTCTCAAGAAGAGGAGCAAACCATTCTCCATCTTCATTCAATTCTTGGAAACAAATGGTCAACAATTGCATCTTATCTTCCATGGAGGACTGATAATGATATAAAGAATTTCTGGAACACTCGATTAAAGAAGAAGCTTATTCAAATGGGTATTGATCCAGTGACTCATCAGCCAGTGATTATAGATCATTACTCAATGGTTGAACACGCTCTGAGGTTACAACAAGAATTAGAAGCTCAGCTGGCAAATCTTCGATACCTTCAAATTCAATACTTATCTACTATATCCTCATATGATGATAACCTAAATGGCAGCATCATCACAAACATGGAACCTTTCGGTTTGTTGAACTCCATCTCTACCATCTCTAATGAGAACCACAACCCAGTTATACACTTTCCACAACTGGACAGTAATAATAATCACAATTATGCCTCGTTTTCTGATGGGATCATTGGTGAGAGCTCTCATTTTTTTGACTTATCACAAGAACGTGAAGGTGGTACTACTATTAATAATGATAATTCCTCGTGGATTATTCCGCCTACTTCTCCATCTATTGCTCCAGATGATGATGTGAATTGA | 807 | 0.3978 | MGRCLRCCGDESSGGVKKGPWTPEEDQKLLHHIHKHGHRNWRLLPKLAGLNRCGKSCRLRWINYLRPGIKREKFSQEEEQTILHLHSILGNKWSTIASYLPWRTDNDIKNFWNTRLKKKLIQMGIDPVTHQPVIIDHYSMVEHALRLQQELEAQLANLRYLQIQYLSTISSYDDNLNGSIITNMEPFGLLNSISTISNENHNPVIHFPQLDSNNNHNYASFSDGIIGESSHFFDLSQEREGGTTINNDNSSWIIPPTSPSIAPDDDVN | 268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc2773g00001 | 268 | CDD | SANT | 73 | 116 | IPR001005 | - | |
Stsc2773g00001 | 268 | FunFam | MYB transcription factor | 72 | 133 | - | - | |
Stsc2773g00001 | 268 | CDD | SANT | 20 | 65 | IPR001005 | - | |
Stsc2773g00001 | 268 | FunFam | MYB-related transcription factor | 17 | 70 | - | - | |
Stsc2773g00001 | 268 | Pfam | Myb-like DNA-binding domain | 71 | 114 | IPR001005 | - | |
Stsc2773g00001 | 268 | Pfam | Myb-like DNA-binding domain | 18 | 65 | IPR001005 | - | |
Stsc2773g00001 | 268 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 16 | 69 | IPR017930 | - | |
Stsc2773g00001 | 268 | Gene3D | - | 73 | 120 | - | - | |
Stsc2773g00001 | 268 | SMART | sant | 17 | 67 | IPR001005 | - | |
Stsc2773g00001 | 268 | SMART | sant | 70 | 118 | IPR001005 | - | |
Stsc2773g00001 | 268 | SUPERFAMILY | Homeodomain-like | 15 | 112 | IPR009057 | - | |
Stsc2773g00001 | 268 | ProSiteProfiles | Myb-like domain profile. | 13 | 65 | IPR001005 | - | |
Stsc2773g00001 | 268 | Gene3D | - | 17 | 70 | - | - | |
Stsc2773g00001 | 268 | ProSiteProfiles | Myb-like domain profile. | 66 | 116 | IPR001005 | - | |
Stsc2773g00001 | 268 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 70 | 120 | IPR017930 | - | |
Stsc2773g00001 | 268 | MobiDBLite | consensus disorder prediction | 244 | 268 | - | - | |
Stsc2773g00001 | 268 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 6 | 202 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc2773g00001 | Stsc-Chr2773 | 3945 | 4944 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc2773g00001 | 1 | 226 | MYB Transcription Factor Family | AT1G34670 | 55.061 | 3.36e-74 | 229 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Stsc2773g00001 | Myb_DNA-binding | 1.5e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc2773g00001 | K09422 | - | gmx:100811162 | 253.832 |