Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc276902g00001 AGTGCCAGGCCCAAAAATCAGAATGGCTATGTTGTAAATTCAGAGTCAAACTCAAAGAAAGCATTTACCACAATTGAAGATGTTCTAACAGGATTGGTAAAATGGCTTTGTGAACAGTTGAAGAAGCCTTCTCATCCTACACGGGGTGTTCCAACTGCCATCAATTGCCTGGCAACTCTACTTAAGGAACATGCGGTTAGGTCTTCCTTTGTTAAGGAAGATGGAATCAAGTTGCTTGTACCTTTGATTTCTCCTGCATCCACCCAACAGTCTATTCAGCTTCTTTATGAAACATGTCTCTGTGTATGGTTCTTATCCTACTATGAACCGGCAATTGAATACTTGGCTACTTCAAAAACCCTTCCTTCTCTTGTTGATGTTGCCAAGAGTTCTACAAAAGAGAAGGTTGTTAGAGTTGTTGTGCTGACCTTTAAGAACTTGCTATCAAAAGGGAAATTGGCTGCTCAAATGATTGACCTTCAGCTGCCACAAGTTGTTCAGAGTTTGAAAGCACAAGCATGGAGTGATGAGG 532 0.4117 SARPKNQNGYVVNSESNSKKAFTTIEDVLTGLVKWLCEQLKKPSHPTRGVPTAINCLATLLKEHAVRSSFVKEDGIKLLVPLISPASTQQSIQLLYETCLCVWFLSYYEPAIEYLATSKTLPSLVDVAKSSTKEKVVRVVVLTFKNLLSKGKLAAQMIDLQLPQVVQSLKAQAWSDE 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc276902g00001 177 Gene3D - 9 177 IPR011989 -
Stsc276902g00001 177 SUPERFAMILY ARM repeat 46 177 IPR016024 -
Stsc276902g00001 177 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 2 177 IPR004908 GO:0000221|GO:0046961|GO:1902600
Stsc276902g00001 177 Pfam V-ATPase subunit H 18 177 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc276902g00001 Stsc-Chr276902 591 1934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc276902g00001 1 177 Primary Pumps ATPases(2) AT3G42050 69.492 4.73e-85 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc276902g00001 K02144 - gmx:100788723 297.745