Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc276823g00001 ATGAGTATGTTGGTGTTGTTTTTGGGAGTAAGTTCCCAACTTACAACAGATTTCTATAAGGCATCATGCCCTAACCTTTTCCAAGTGGTGAGAACACAGGTTCGAAATGCTCTCGTGAATGAGATGCGAATGGGTGCTTCTTTGCTTCGTCTCCACTTTCTTGATTGCTTTGTAAATGGTTGTGATGGATCAATATTGCTAGATGGAGGCAGTGATACAGAAAAGTTTGCAGGTCCAAACTTGAACTCTGCAAGAGGATTTGAAGTTGTAGACACAATCAAAAGTTCTGTGCTGATATATTAG 303 0.4026 MSMLVLFLGVSSQLTTDFYKASCPNLFQVVRTQVRNALVNEMRMGASLLRLHFLDCFVNGCDGSILLDGGSDTEKFAGPNLNSARGFEVVDTIKSSVLIY 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc276823g00001 100 SUPERFAMILY Heme-dependent peroxidases 13 96 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc276823g00001 100 PRINTS Plant peroxidase signature 85 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc276823g00001 100 PRINTS Plant peroxidase signature 47 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc276823g00001 100 PRINTS Plant peroxidase signature 23 42 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc276823g00001 100 Pfam Peroxidase 30 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc276823g00001 100 Gene3D - 13 98 - -
Stsc276823g00001 100 ProSiteProfiles Plant heme peroxidase family profile. 13 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc276823g00001 100 PANTHER PEROXIDASE 72-RELATED 7 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc276823g00001 Stsc-Chr276823 218 619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc276823g00001 2 97 Peroxidase AT5G19890 63.542 5.99e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc276823g00001 K00430 - gmx:100817622 151.369