Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc276612g00001 ATGCAAGACGTTGGTGAAGAATATTTTGATGAATTAGTAGCGAGATCATTTTTCCAACCTCATGGTACTCGAGAAACGATATTTGTGATGCATGATCTCATGCATGATTTGGCAATGATCTTTGCTGGAGAATTCTGTTCCAGGGCTGAAGAGCATGAGAAGGCTGTTGAGATAGGTATGAAAACTCGTCATTTGTCACATATTGCAAGAGAAGATTATCCAATCTCAAAACTTTTGGAAGTTTGTGACCGAGTAAAACATACCAGGACATTTCTTGAAATCAACTTGAATAAACGGGAATCATTTAACGTAGAAAATGCACCTTGTATCTTGTTGTTGTCACAATTGAACTACCTCAGAGCTTTGTCTTTCAAGTCAGTTCGTCTTGAGTCACTGCCTGATTCAATAGGCAAGTTGACTCATCTTCGTTATTTGAATCTGTCTGATACCGACATTGTATCATTGCCTGAGTCATTGGGTAGCCTATACAATTTGCAGACCTTGAAGCTATATGGATGTTACCGGTTGGAAATGCTTCCAGATAGCATGCAAGATCTTGTAAATTTACGTCATCTTGATATTAGACAGACTGGGTTGAATAAGATGCCGACAGGCATGAGCAAGTTGAAAAGTTTGCAGTTTTTAAGCAACTATGTTGTTGGGAAGGATGAAGGGAACAAGATCAGAGAACTGGGAGCACTTGCAAATCTACAGCAATCAATTGGCATTTTCAAGTTGGAGAATGTGGTCAACAGTAATGAAGCTTCGGAGGCAAGAATGTCCGATAAAGATGCCATTGACCGTTTGAAGTTGCATTGGTCTTCGAAAGAGGATGAGAATATAGTTGATTTCCAAATTGAAGAAGATATACTGGACAAGTTACAACCTCACAGTAATTTGAAAGAACTACAAATTTGGGGTTACAGGGGTACAGCATTTCCAGATTGGTTGGGACATCTTTCATACGACAACATCACCAGCATGACACTGAGTGGTTGCAGGAATTGTCGTGTTCTTCCTTCACTTGGACAGTTGCCCTCTTTGAAGCACCTATCGATTTCAAATTTTGAAAGATTGGAGATTGTAGGGGCTGAGTTTTACAGAGATGATGAATCTTGTTTAGAGACTCCATTTCCAATGCTTGAAACTCTTATAATCCATTCAATGCCTTGCTGGAAGGAGTGGCATTCATTGGAGTTGAATTCGTTTCCTCGACTTAGGGAGCTTACCATAAGGAACTGTCACATGTTGAGAGGAGATTTGCCAAATCATCTACCATCTTTGCAATCACTTGGGATTCACAATTGCGAGCAGCTCAGTAGTTGTCTTCCAAGAGCTCCTGCAGTTACCAAATTAAGGATAGTTGGCGGCAATGAAGTTGTTGAAGGGAAGCATTTAGTGGAGTCCGCGATAGAGGCTATTAAGCAGACGCAATTGAGTTGCCTGACTTGTTTATCAATCTCCCATTATTACTCCTACATGTTGTTTCCAGTGACTGCTATTCCCCCATCACTAGAGAACTTGGAGATAGGGAGTTGCAGAAAACTAGAATTCCAAATGGATGGCCAACATCACTCGCTGCAGGAATTATCAATAACTGAAAGCTGTGATTCAGTTACATCCTTCTCCTTGTTGGATGCCTTTCCAAATCTCATGCGTGTTCAAATCAGGAAGTGTGAAAAGATGGAATCTATTGTGGTTTCAGGCTCTCTTTCATGTCTCCGTTATTTATATATCTACCATTGTGGGAGTTTGAAATCGGTGTCAATGCTATGGATGCCAGCACCTCAGCTAGAGAATCTCGTATTAGTGGGTTGCACAGAGATGGATTTCTCACCTACAGGGGATCCACCCCGTAGCCTGAGATCTCTTGTAATCAGTTACTCGGACAAACTTGCGAGCAGTGCAACATTCATGAATTCCCAATTTCACTGGCTTACTCAACTTAGTATTGAAAGGGAATGTGGGAGAGCCAGTGTGAAATCTTTCCCAAAGGAAGGTTGGTTGCCTGCCTCACTTGAGTTTCTCAGACTGAATTACATTAAAAGTGTGGAGACGTTGGAATGCAAGGGACTTGCCCACCTCACCTCCCTCCAAACATTAGATATTTATGGATGTCACAAGTTGGAGAA 2132 0.4132 MQDVGEEYFDELVARSFFQPHGTRETIFVMHDLMHDLAMIFAGEFCSRAEEHEKAVEIGMKTRHLSHIAREDYPISKLLEVCDRVKHTRTFLEINLNKRESFNVENAPCILLLSQLNYLRALSFKSVRLESLPDSIGKLTHLRYLNLSDTDIVSLPESLGSLYNLQTLKLYGCYRLEMLPDSMQDLVNLRHLDIRQTGLNKMPTGMSKLKSLQFLSNYVVGKDEGNKIRELGALANLQQSIGIFKLENVVNSNEASEARMSDKDAIDRLKLHWSSKEDENIVDFQIEEDILDKLQPHSNLKELQIWGYRGTAFPDWLGHLSYDNITSMTLSGCRNCRVLPSLGQLPSLKHLSISNFERLEIVGAEFYRDDESCLETPFPMLETLIIHSMPCWKEWHSLELNSFPRLRELTIRNCHMLRGDLPNHLPSLQSLGIHNCEQLSSCLPRAPAVTKLRIVGGNEVVEGKHLVESAIEAIKQTQLSCLTCLSISHYYSYMLFPVTAIPPSLENLEIGSCRKLEFQMDGQHHSLQELSITESCDSVTSFSLLDAFPNLMRVQIRKCEKMESIVVSGSLSCLRYLYIYHCGSLKSVSMLWMPAPQLENLVLVGCTEMDFSPTGDPPRSLRSLVISYSDKLASSATFMNSQFHWLTQLSIERECGRASVKSFPKEGWLPASLEFLRLNYIKSVETLECKGLAHLTSLQTLDIYGCHKLE 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc276612g00001 710 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 478 652 - -
Stsc276612g00001 710 SUPERFAMILY L domain-like 29 453 - -
Stsc276612g00001 710 Gene3D Ribonuclease Inhibitor 265 452 IPR032675 -
Stsc276612g00001 710 Gene3D Ribonuclease Inhibitor 61 249 IPR032675 -
Stsc276612g00001 710 Gene3D Ribonuclease Inhibitor 453 710 IPR032675 -
Stsc276612g00001 710 SUPERFAMILY RNI-like 382 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc276612g00001 Stsc-Chr276612 13 2144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc276612g00001 119 215 WRKY Transcription Factor Family AT4G12020 33.673 5.55e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc276612g00001 - - ahf:112728729 939.102