Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc276261g00001 ATGAATAAAGCTGTAGCTGATGGAGTGAACGTCTTGTCCATTTCATTAGGTGGAGTCTCATCTTATTCCCATGATAGTATTCCTATAGCTGCATTTGGAGCAATGGAGCCACCGTGTACTTCTGTCACAACCCTGAACCCGCCGTCGGAGTATTCGGAAGATAGGACCTCCAAGGCTCGAACCACAGCCGTCCTTCCTCGCAGCCCCCTCCTCGCCGTCGTCCTTCCTCGTAGCCCCGTCTTCGACCTCCTTCTTTTATTTTTGGAAGATTTCTGTGTTGCTGCCACCATCCCCTTCCCATTGGTGTTTCCTCTTGCCGTTGCTGCTGGTGAAGTGTTGCTGTGCTGGTCATCACTGCCGATGAACATCCAATTTGGAGAAAAGCTTGCAATATTCTGGTCTACTTCATCTACCCAACCCGGGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAGACAAGTCAAGGAGTGGA 491 0.4969 MNKAVADGVNVLSISLGGVSSYSHDSIPIAAFGAMEPPCTSVTTLNPPSEYSEDRTSKARTTAVLPRSPLLAVVLPRSPVFDLLLLFLEDFCVAATIPFPLVFPLAVAAGEVLLCWSSLPMNIQFGEKLAIFWSTSSTQPGVLSWGEGYYNGDIKTRKTSQGV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc276261g00001 163 Gene3D Peptidase S8/S53 domain 1 36 IPR036852 GO:0004252|GO:0006508
Stsc276261g00001 163 PANTHER TRANSCRIPTION FACTOR TT8 130 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc276261g00001 Stsc-Chr276261 27 2503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc276261g00001 122 162 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 68.293 3.21e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc276261g00001 - - aip:110267647 72.0182